Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi303g00031 ATGATTACCCTCGTTAAAAAGGTTGTTGACAACTCCTTCTGTGCTATAGCAATTGCTGAAGTTAATTTGAACAAGTGTGAGCCATGGGATTTGCCTGGTTTTGCTAATATGGGTGAAACAGAATGGTACTTTTTTAATGTGAGGGATAGAAAATACCCGACTGGTTTAAGGACAAATAGAGCCACTGATGCTGGCTACTGGAAGGCCACAGGCAAAGATAGGGAGATATTCGCGACAAATGCATTGATTGGGGTGAAGAAAACACTAGTTTTCTACAAAGGAAGAGCTCCAAAAGGTGGAAAAACCAACTGGATAATGCATGAATATAGATTGGAGGGTAAAAATTCTGAATATAATCTCGCTAGGCTTGGAAAGAAAATGCATGTTCCAAACTTTGGAAGGTTCAACACCTTTGGAGAGGAACCATCACCTCCTTCTCAATTGCTTCCATTGACGGATTTTCCTCCACACAACAACATAACAAGAACAACTGCAGGTGATTTGTCTCAATTGATCAACTTCTCCAATCCAAATCAAATGGAGGATCATAGAGCAAAAGATGACATTGTTGATAGCATGGAAGCTCCTATCTTAGCCATTCAATCTTCAGGACCCTACGATATTTCTGCTTACGCTAAACCAAACCCTGCATTCTCCAACCATTCCACAATGATTGCACAACAAATTGGCCAACCAAAGTATCCTGCTTATTCTCTGCCTCAAGAACAACCAAAGTTAAGGATGCTAGCGGGAAATCCTGGATCGAGTTTACAACACATTCAAAAAATAGATTTTTCTCTCGGAACAGACTTTAATGCTGATATCTCCCCTGTAACAACCAACAGTGACACTTTCAAAGGTGGTTTGGGAATCAAGAACATGCATCAGCTTCTACATGGTCGGTGGATATTGATTACTTGTGGAATTACTAATTAA 936 0.4006 MITLVKKVVDNSFCAIAIAEVNLNKCEPWDLPGFANMGETEWYFFNVRDRKYPTGLRTNRATDAGYWKATGKDREIFATNALIGVKKTLVFYKGRAPKGGKTNWIMHEYRLEGKNSEYNLARLGKKMHVPNFGRFNTFGEEPSPPSQLLPLTDFPPHNNITRTTAGDLSQLINFSNPNQMEDHRAKDDIVDSMEAPILAIQSSGPYDISAYAKPNPAFSNHSTMIAQQIGQPKYPAYSLPQEQPKLRMLAGNPGSSLQHIQKIDFSLGTDFNADISPVTTNSDTFKGGLGIKNMHQLLHGRWILITCGITN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi303g00031 311 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 209 - -
Sebi303g00031 311 SUPERFAMILY NAC domain 4 116 IPR036093 GO:0003677|GO:0006355
Sebi303g00031 311 ProSiteProfiles NAC domain profile. 1 126 IPR003441 GO:0003677|GO:0006355
Sebi303g00031 311 FunFam NAC domain-containing protein 100-like 1 131 - -
Sebi303g00031 311 Gene3D NAC domain 2 129 IPR036093 GO:0003677|GO:0006355
Sebi303g00031 311 Pfam No apical meristem (NAM) protein 4 111 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi303g00031 Sebi-Chr303 454854 456037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi303g00031 4 163 NAC Transcription Factor Family AT5G07680 57.386 1.49e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi303g00031 NAM 7.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi303g00031 - - gmx:100782172 326.25