Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi303g00005 ATGTCAGAAAAACTTTTCAACAATTCATCCTTGGGTGTGCCTTTACTACCCGAGTGTAAGCACTCTGTTCTAGGACATTCCATAGATGAGGAGAAAGTTATAGCCTCTCATCCTCACACCAAGAATACCGTATCTTTCTCTCGCACATGTTTTAATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTAGCATCTGGAGGATGGTTAAGCTTAGTTCTTCTATTTGCTATTGCTGTTGTAGCATTTTACTCAGGATTGTTGATGAAAAGATGTATGGATAAGAATTCAGACATTAGAACCTACCCTGATGTAGGTGAGCTTGCATTTGGAAAGATAGGAAGGCTAATAGTATCAGTATCTATGTACACAGAACTCTACTTGGTTTCAATAGGGTTCTTGATTCTAGAAGGGGACAACTTGAGCAACTTATTCCCCATTGAGGAGCTTCAAGTGGTTGGTGGTTTTGCAATTAGTGGAAAGCAATTCTTTGTGATATTAGTTGCTCTTATAATTTTGCCTACAGTTTGGTTGGACAACTTGAGTCTACTTTCTTATGTATCTGCAAGTGGTGTCCTTGCTTCTGCTATCATCATCTTGTCAATATCATGGACTGCATCAATTGATGAAGTTGATTTTCACCAAAAGGGAACTCTTGTTAATTGGAGTGGGATCCCCACATCAGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCTGTCTTCCCAACTCTATACAATTCTATGAGAAACAAACATCAATTCTCTAATGTCTTACTTGTGTGCTTTTTATTAGCCACCATTGGTTATGCATCCATGGCTATAATTGGTTACCTAATGTTTGGTCCAGATGTTGAATCACAGTATGCTTTGATGACAACACCTATTACCAATGCTTTGAATGATTTGCTTCCAAGGACATACAAGAACAGAGTGACCAACATCTTAGTCAGCACTGTATTGGTAATCAGCACTGTCATTGTTGCCCTGGTAGTTCCTTTCTTTGGGGATCTAATGTCCCTGGTTGGAGCATTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTAAAGATTTCAGGATCTTACATGAAATTTGGGTTTGAGACTGTAGTCATAGTGGCAATAATAGTAGCAGCTATAGGAATGGGAATATCTGGGACATACACCTCTGTCACTGACATAGTCCACAGTTTGTAA 1224 0.393 MSEKLFNNSSLGVPLLPECKHSVLGHSIDEEKVIASHPHTKNTVSFSRTCFNGLNAISGVGILSVPYALASGGWLSLVLLFAIAVVAFYSGLLMKRCMDKNSDIRTYPDVGELAFGKIGRLIVSVSMYTELYLVSIGFLILEGDNLSNLFPIEELQVVGGFAISGKQFFVILVALIILPTVWLDNLSLLSYVSASGVLASAIIILSISWTASIDEVDFHQKGTLVNWSGIPTSVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLLVCFLLATIGYASMAIIGYLMFGPDVESQYALMTTPITNALNDLLPRTYKNRVTNILVSTVLVISTVIVALVVPFFGDLMSLVGAFLSVTASILLPCLCYLKISGSYMKFGFETVVIVAIIVAAIGMGISGTYTSVTDIVHSL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi303g00005 407 Pfam Transmembrane amino acid transporter protein 43 303 IPR013057 -
Sebi303g00005 407 PANTHER OS05G0424000 PROTEIN-RELATED 52 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi303g00005 Sebi-Chr303 78882 80821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi303g00005 45 407 Amino Acid or Auxin Permease AAAP Family AT3G28960 55.385 1.31e-149 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi303g00005 K15015 - gmx:100794374 607.831