Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi302g00036 ATGGATTCTGTGAAGATTTTCAAAGCCCTCGTCCACCACACTGACAACGAGCCATCCGAACAACAACAACAATCCCTCAACTCGGCCGAGTCCATCCGAATCGTCTGCAACGTGACTCACTTCCCTGACTCGTGCTTCGCCGCCGTATCCTCCTCCGCCCAAAACCCCACCGATCCCGAAGCCATCCTCAGCCTCTCTCTCCGTGCCTCCATCGATGAGCTCACCAGGCTCGCCTCTTCGCTCGGAGCCAAAGCCTCTAATTCCAAGGGGTCCGCACTGGCTGACTGCAAGGATCAGATAGACGATGCGCTGAGTCGACTCAACGACTCGCTGTCGGCGATGGCGGCAGTTCCCGGCAGCGGCGGCGTAACGCTGACGGATAGAAAGATCAGTGACATCCAGACGTGGGTGAGCGCGGCGATGACGGACCAACAGACTTGCGTTGATGGATTGGAAGAGGCTGGGTCTGTGGCTGCTGTTGCTGAAGTGAAGAGCATGATGAAGAGATCGAGCGAGTACGTTAGCAACAGCTTGGCCATTGTTGCTAATATACGCACTTTGTTACAACAACTCCATATGCCACTCCATTGA 591 0.555 MDSVKIFKALVHHTDNEPSEQQQQSLNSAESIRIVCNVTHFPDSCFAAVSSSAQNPTDPEAILSLSLRASIDELTRLASSLGAKASNSKGSALADCKDQIDDALSRLNDSLSAMAAVPGSGGVTLTDRKISDIQTWVSAAMTDQQTCVDGLEEAGSVAAVAEVKSMMKRSSEYVSNSLAIVANIRTLLQQLHMPLH 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi302g00036 196 PANTHER PECTINESTERASE 31 182 - -
Sebi302g00036 196 Pfam Plant invertase/pectin methylesterase inhibitor 31 180 IPR006501 GO:0004857
Sebi302g00036 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 184 IPR035513 -
Sebi302g00036 196 NCBIfam pectinesterase inhibitor domain 25 183 IPR006501 GO:0004857
Sebi302g00036 196 CDD PMEI-like_3 35 186 - -
Sebi302g00036 196 FunFam Pectinesterase 28 185 - -
Sebi302g00036 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 185 IPR035513 -
Sebi302g00036 196 SMART PMEI_2 27 180 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi302g00036 Sebi-Chr302 916456 917196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi302g00036 12 196 Carbohydrate Esterase AT1G53840 38.579 1.09e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi302g00036 - - gmx:100789567 217.624