Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi302g00034 ATGGTGCACGTGTCGTTTTACCGCAACTATGGAAAGACGTTCAAGAAGCCTCGTCGTCCCTACGAGAAGGAGCGTTTGGATGCTGAGTTGAAGTTGGTTGGAGACCGCATCCGCAACAATGCAAGGAGCCTTCTCACCCTTGACGAGAAGAACCCTCGCAGGATCTTCGAGGGCGAGGCTCTGCTTCGCAGGATGTTCCGTCATGGGCTTATTGATGAGACTCAGAACAAGCTCGATTATGTCCTCGCTCTTACCGTCGAGAATTTCCTCGAGGTTGTGAACATCCCTTCATTCATGGTGAGGGTTGACTCACAGAAGCATATTGATTTTTCACTCACCAGTCCACTTGGTGGTGGCCTTCCTGGAAGGGTGAAGAGAAAGAACCTTAGGGCTGCTGCTAAGAAGGCTTCTGGTGGAGATGGAGATGAGGAGGATGAGGATTAA 444 0.5068 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGDRIRNNARSLLTLDEKNPRRIFEGEALLRRMFRHGLIDETQNKLDYVLALTVENFLEVVNIPSFMVRVDSQKHIDFSLTSPLGGGLPGRVKRKNLRAAAKKASGGDGDEEDED 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi302g00034 147 SMART Ribosomal_S4_2 8 91 IPR001912 GO:0019843
Sebi302g00034 147 Pfam Ribosomal protein S4/S9 N-terminal domain 9 91 IPR001912 GO:0019843
Sebi302g00034 147 PANTHER 30S 40S RIBOSOMAL PROTEIN 7 91 IPR022801 GO:0003735|GO:0015935|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi302g00034 Sebi-Chr302 886169 886988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi302g00034 1 137 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 64.706 1.25e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi302g00034 K02997 - gmx:100807649 215.698