LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi302g00028	ATGGAAGGAGAAGACCAAGAAAGCGCTTCCTGTTCCACCTCATCTTCCTCCCCATACCCATCCTTAGCCATCTCCGCTGAACCAACAACTTCCAACTCAAGCCGATCTAACAACCAACAACTCGTAACAACCGCCGAACCTTCCAACAAAAAACCACCTCCAAAACGAACCTCCACAAAAGACCGCCACACGAAGGTCGACGGCCGCGGCCGTCGCATTCGAATGCCGGCTCTCTGCGCCGCCAGAGTCTTCCAACTCACGCGCGAGCTCGGACACAAATCCGACGGCGAAACCATCGAGTGGCTCCTCCAACAAGCCGAACCCGCCGTCATCGCCGCCACCGGCACCGGCACAATCCCAGCCAACTTCACATCCCTCAACATCTCCTTACGAAGCTCAGGCTCCTCCATGTCGGTTCCATCTCAGCTTCGATCTTCATACTTCAACCCTAACTTCTCTCTTCCACAACGAAGAACCAGTTTATTCTCCGACACCACCAACAATTCCTCCGCCACCGCAACGCTTCTCAATTTCCAATCCAATAACAACTTAATCAACACTGGTATGTTTCAAGCTAAGCATGAATTGCGTGAAGGTAGCAACACGGCCAACACGACGTCGTTGGATAAACGAAGAGGTGGAGAGCAAGAGGAGCAGCATCAAGTTGGAAGCTATTTGTTGCAGTCAAGTAGTGCAGGGGCAATTCCGGCAAGTCATGCTCAAATTCCAGCTAATATATGGATGTTGGCGAATTCTAATAACCAACAACAAGGAGGTATGACTATGAGTGGTGAGGCTTCTGCTTTGTGGATGAATAACAGTGGTTTGTATAGAAGCACTGTGTCTAGTGGATTGCATTTCATGAACTTCCCAACCCCTATGGCGTTGTTGCCAGGTCAGCAATTAGCGTCTTCTGGAATTGGCGCTGGAAATATAAACATAAATGAAGGACATTTGAGTATGCTTGCTGGGTTAAACCCTTATCGGCAGGTCATTGGCGTTTCGGAGTCTCAGGCGAGTGGATCACATTCACATAATCATGGTGGAAGTGAGGATCGACATGATAACACCAGTCACCATAACACATAA	1089	0.4931	MEGEDQESASCSTSSSSPYPSLAISAEPTTSNSSRSNNQQLVTTAEPSNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSLPQRRTSLFSDTTNNSSATATLLNFQSNNNLINTGMFQAKHELREGSNTANTTSLDKRRGGEQEEQHQVGSYLLQSSSAGAIPASHAQIPANIWMLANSNNQQQGGMTMSGEASALWMNNSGLYRSTVSSGLHFMNFPTPMALLPGQQLASSGIGAGNININEGHLSMLAGLNPYRQVIGVSESQASGSHSHNHGGSEDRHDNTSHHNT	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi302g00028	362	MobiDBLite	consensus disorder prediction	337	362	-	-
	Sebi302g00028	362	MobiDBLite	consensus disorder prediction	195	222	-	-
	Sebi302g00028	362	MobiDBLite	consensus disorder prediction	1	52	-	-
	Sebi302g00028	362	ProSiteProfiles	TCP domain profile.	59	113	IPR017887	-
	Sebi302g00028	362	MobiDBLite	consensus disorder prediction	53	72	-	-
	Sebi302g00028	362	PANTHER	TRANSCRIPTION FACTOR TCP4-RELATED	15	351	IPR005333	GO:0003700
	Sebi302g00028	362	Pfam	TCP family transcription factor	57	220	IPR017887	-
	Sebi302g00028	362	MobiDBLite	consensus disorder prediction	346	362	-	-
	Sebi302g00028	362	MobiDBLite	consensus disorder prediction	1	72	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi302g00028	39	355	TCP Transcription Factor Family	AT3G47620	45.432	1.48e-61	203

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	TCP	Sebi302g00028		TCP	1e-39	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi302g00028	-		-	qsa:O6P43_022832	430.639