Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi302g00018 ATGGGGAGACCACCTTGCTGTGACAAAATTGGGATTAAGAAAGGGCCTTGGACTCCAGAGGAGGACATCATCTTAGTCTCTTACATTCAAGAACATGGACCAGGGAATTGGAGATCAGTTCCCACCAGTACAGTAAAAGCTGCAGGCTTAGATGGAACTAACTATCTTCGACCAGGCATCAAACGAGGCAATTTCACTGATCATGAAGAAAAAATGATAATCCACCTCCAAGCGCTTTTGGGCAACAGGCAAAAGGGTCAGTGGGAGAGAAGGCTTCAAACAGATATACACATGGCCAAGCAAGCCTTGTGTGAGGCACTGTCCCTTGACAAGCCAACCCCAGAGACTAACTCCTTTAATTACCATCACCCTGTTACCAACAACGCCACAACACCAAACCAAGCTTCCCCATATGCATCAAGCGCTGAAAACATAGCCCGATTGCTCGAAAACTGGATGAAGAAAAACCCGAATTACTCATCAACTGAGACAAATTCAGGAAATTCGTTCAGCAACATGGTGACCACAGGATCCAAAAACACCAACTTTACTGCCACTGGCCCCTTCCAAGATGAAAGCAAGCCACTAAACCAGGAGCCACAAGTCCCTCTCATGTTGCTGGAGAATTGGCTGTTTGATGATGGAGCAGCTCAATGCAATGAAGATCTAATAAACACGTCATTGGAGGAAAGTACAACAGGGTTGTTTTAG 711 0.4571 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTSTVKAAGLDGTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRQKGQWERRLQTDIHMAKQALCEALSLDKPTPETNSFNYHHPVTNNATTPNQASPYASSAENIARLLENWMKKNPNYSSTETNSGNSFSNMVTTGSKNTNFTATGPFQDESKPLNQEPQVPLMLLENWLFDDGAAQCNEDLINTSLEESTTGLF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi302g00018 236 CDD SANT 16 40 IPR001005 -
Sebi302g00018 236 Pfam Myb-like DNA-binding domain 14 41 IPR001005 -
Sebi302g00018 236 Gene3D - 12 50 - -
Sebi302g00018 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 42 IPR017930 -
Sebi302g00018 236 ProSiteProfiles Myb-like domain profile. 9 40 IPR001005 -
Sebi302g00018 236 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 116 - -
Sebi302g00018 236 SUPERFAMILY Homeodomain-like 15 84 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi302g00018 Sebi-Chr302 480700 481884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi302g00018 1 83 MYB Transcription Factor Family AT5G62470 80.682 1.71e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi302g00018 Myb_DNA-binding 1.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi302g00018 K09422 - gmx:100807020 305.449