Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi301g00049 ATGGGAAAGCGAATTCGGGAGAAAGAGGGTGCAACATCTAATGGAGTTAATTGTCATCCTACTCATCCAGGGCGAGTATGGGGAATTCTTCATGTTATAAAGTATCATCATTGGCGTCATGTCAAGAGAAGGCTTACATACAGGAGGCATGGTGGTGGAAGACGTGATGCAAGAGATGATATTCCAGGAACTTCTGATGATTCTGTGGTTGGTAACATGTCGTTACATTGTAAGCCAAGTCCAGCATTATCTAATGTTGAAGAAAAGATGGTACAATCCACTCCACCAGCCAAACAGTCTATTAAATCCAGATTAAAAGCACTTCTTAATGAAGAAGTATACAAAAAGAAGGGTAGACATAAGAGAAGCTCAACCTGTCCTGCAAAGTCACAACTAAACCGTCCTGATTCTGTTCATCACTTGGAGGTTGATCCACTTAGTGAAATGTTATTAACTGTTGAGAGTCCTGAACCAGTTCTAGAAACCTTTCAAAACCATCTTGCTGCTGGCACATTGGATGTATTGTCACCAGTTTTCTCTGGGAAATCAATTACCAACAATGACAAATGTGTAGATTGTGGCATTATCTTTTCTAGTGACACTTTGGAAGATCACAAGACTCATAAGCATTGGACTGATGCAAAAAACTTGAATGCCCAGCATGAAGGTGTGCCAGAAGAGAAGTTGATGAATGCAAAGATACTTACAACTGATGCTTCACCTCACCTTTTCAAGGATTTTCTTGATGCTCTGGATGTTATCAACACAAACAAGGACTTTCTATTAAAATATATACAGGATCCAGGCTCTCCTTTGCCATTCCATATACATGATCATGAATCTCCCAGTGGTAAAACAAGAAGATCCAAATCTATCTCATTTCCTGTTTCTGGCTCATCATCAGGAACCAAAGATACAGCATCAGGCCAACTAATAAACCAAATGGTTGATGACTTGTTCATTTCAAATGTGGGGAAACAATCACAGATTCAAACTCACATGCAAAATGTATCCATGTCTGAGTCTCCAGAAGATTTTCAACAAAAGTCCTTATCATCATCAGGTTCATCACATAGAGGTGATCAATTCCTCAATCCAGATCAAGAAGGGGCTGCAAGAGATTGTAATAGTTCATCAGCTTCATCCCAGGTTCCTAACCAAGTGAAAACTAAGCATTTCAAGGATCTTAGAGAGAAGATAAAGTATATAATTGAAGAAAGCAAAAATGAAAAATATCGCATTACCATGGATGCTATACTTGACAAAATTCCTCGTGGAAGTAGGCTTTCCAAGAATGTAAAGAAGTTGATCCATGACCAATCCAAAGACCCCACAATCAATGGAGAAGGAAAAGACAATGCTTTGAATCGTCTTTCTTCTTACTCCTTCAATAAACGTCAACCACCAAACATGAGGACTTCATCTCTAAAAGAATCAGCTAATAGATATTCTCAGCTATATGAGACTTGTTTTAACAGTGAAGCCAAGTATCCTAAGACTGAGAACTTAAGATTGAAAACAGAAGAGAGACCAATAGTAAAGACCCCAAAATCCTTTAAGAGGTTTCTTTCATTACCAAATTTAAAATCTTACTTCAATCATAGTGAGGAGCCTTCTGTTCATTTATCTCCCCAGAATTCAATGAGGAAATCTGGAGATAGAACCACAAGCACAAGTGTTATTGATCATCAGAGCAAGTTTGACCATAGTGATGACTCAAAGAGTCAAAATCTTCCACCTACACTTGCTGATAACACAAATCAAGAAAGTAGCTTGAATGCTGAACGAAAACAGCTTCTTGTGAGGAGTGCTTCAAAATCAGGATTTGATACTTTAGGAAACTTAGGAGACAATGATGGTGTTTTAGGAAACCTGCCACCTACACTTGCTGATAACACAAATCAAGAAAGTAGCTTGAATGCTGAACAAAAGCAACTTCTTGTAAGGAGTGCTTCAAAATCAGGAATAGATGTTATAGGAAACTTGGGAGACAGTGATGATTTTGCTTGCAATGAACAGGACTTTGGACCAGCAACAGAATCTAGTCCTTTGCAGGTAGAAGGAAACTCAGTCTTCTCTTCTGACACCAGCTTCCTAGATGTTACATTTGAGCTTGAGAACTTAAACATACTGGAAGGGCCAGATGATGAATTTGATAACATGGCTGAGCAAGAGCAACATGAAGCTAATATTGATCACCCTGAGGTGGTTGAGAATTTTCAGAAATTTGGAACTCTAAGCAAGCGCTTCAACTATGAAATTCCAAGTATTGATGTGGATGCAAATAATGAAGCTGCATTTAATTATGTGAGAAAGGTTTTAGAGCTCTCAGGGTTTACTAGCCATGAATCTCATGGGATATGGTATTCTGATGACCAGCCAGTTGATCCTTCAGTATATGAAGAATTGGAGGGCTGCTTGCTTCTGGATCCTGATTGTTCTGGAAATTGTGAGGAAGATGGACAGTGTAATCATCTGCTCCTGTTTGATATAATCAATGAAGGATTGATGGAGATTTTTGGGAGATCATATAACTATTATCCTAGACCCTTGTCTTCTCTCTCCCATGTTCATACATTGCCAGCAGGAGATAATGTTCTCCATAAAGTATGGACCCTTATTAGCTGGTATCTGAGTTCACCATCTGAGGCTTACCCATCATTGGATTACTATGTGAGCAGAGATCTAGCAAAAAATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTGGGGCTTGAACTAGATGACATGATTTTTGATGATCTTTTGGAGGAAATTATCTGCACTTAA 2796 0.3873 MGKRIREKEGATSNGVNCHPTHPGRVWGILHVIKYHHWRHVKRRLTYRRHGGGRRDARDDIPGTSDDSVVGNMSLHCKPSPALSNVEEKMVQSTPPAKQSIKSRLKALLNEEVYKKKGRHKRSSTCPAKSQLNRPDSVHHLEVDPLSEMLLTVESPEPVLETFQNHLAAGTLDVLSPVFSGKSITNNDKCVDCGIIFSSDTLEDHKTHKHWTDAKNLNAQHEGVPEEKLMNAKILTTDASPHLFKDFLDALDVINTNKDFLLKYIQDPGSPLPFHIHDHESPSGKTRRSKSISFPVSGSSSGTKDTASGQLINQMVDDLFISNVGKQSQIQTHMQNVSMSESPEDFQQKSLSSSGSSHRGDQFLNPDQEGAARDCNSSSASSQVPNQVKTKHFKDLREKIKYIIEESKNEKYRITMDAILDKIPRGSRLSKNVKKLIHDQSKDPTINGEGKDNALNRLSSYSFNKRQPPNMRTSSLKESANRYSQLYETCFNSEAKYPKTENLRLKTEERPIVKTPKSFKRFLSLPNLKSYFNHSEEPSVHLSPQNSMRKSGDRTTSTSVIDHQSKFDHSDDSKSQNLPPTLADNTNQESSLNAERKQLLVRSASKSGFDTLGNLGDNDGVLGNLPPTLADNTNQESSLNAEQKQLLVRSASKSGIDVIGNLGDSDDFACNEQDFGPATESSPLQVEGNSVFSSDTSFLDVTFELENLNILEGPDDEFDNMAEQEQHEANIDHPEVVENFQKFGTLSKRFNYEIPSIDVDANNEAAFNYVRKVLELSGFTSHESHGIWYSDDQPVDPSVYEELEGCLLLDPDCSGNCEEDGQCNHLLLFDIINEGLMEIFGRSYNYYPRPLSSLSHVHTLPAGDNVLHKVWTLISWYLSSPSEAYPSLDYYVSRDLAKNDGWMNLQFDSECVGLELDDMIFDDLLEEIICT 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi301g00049 931 Pfam Protein of unknown function (DUF3741) 227 270 IPR022212 -
Sebi301g00049 931 MobiDBLite consensus disorder prediction 535 563 - -
Sebi301g00049 931 Pfam Domain of unknown function (DUF4378) 767 927 IPR025486 -
Sebi301g00049 931 MobiDBLite consensus disorder prediction 287 307 - -
Sebi301g00049 931 MobiDBLite consensus disorder prediction 371 389 - -
Sebi301g00049 931 PANTHER PROTEIN TRM32 1 931 IPR044257 -
Sebi301g00049 931 MobiDBLite consensus disorder prediction 116 135 - -
Sebi301g00049 931 MobiDBLite consensus disorder prediction 273 307 - -
Sebi301g00049 931 MobiDBLite consensus disorder prediction 535 591 - -
Sebi301g00049 931 MobiDBLite consensus disorder prediction 331 363 - -
Sebi301g00049 931 MobiDBLite consensus disorder prediction 331 390 - -
Sebi301g00049 931 MobiDBLite consensus disorder prediction 49 71 - -
Sebi301g00049 931 MobiDBLite consensus disorder prediction 574 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi301g00049 Sebi-Chr301 1114569 1118547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi301g00049 678 921 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 43.243 4.42e-57 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi301g00049 - - gmx:100807303 1159.82