Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi301g00046 ATGATGGAAGACAAGGGTAATAGGGTTAATGAGGGTGAAGGTGAAGATGTAAATAATTTGAAATCCCCTGATGAAGAAAATGCTTGTTCTGGTGAGGTTGTTCCTGATGTGTTCAAAAGTATTTCTGAGTTAACTGATGACGACATTAGAATGCTTGAGTTTGATTCTGAACTGGATGCATATAATTTTTATTGTGAGTATGCGAAATTCAAAGGGGAAAAGAGTGAGAAGCATTTAAATAGGACAAATAGAATTAGGGAAGATAAGGCCATTACTCGTACCAATTGTCTTGCAAGGCTTCGATTGTATTTAGATAATAATAATAATAGTGGGAAGTGGAGGGTTGGAATGTTTGAGCCACAACACAATCATGAGCTAACTCCTGCAAATATGGTACATTTGATGCCTGCTTATCGTGGTCTGAGTGCTGCTGATAAGGCACAAGTAAATAGTCTTCACTTATATGGTGTTAGGACTTGTCATATAATGAGGCTAATAATGGGTCAGAAAGGTGGTCACTCAGATTTGGGATTTTGTAAGAAGGACTTGTACAATCATATTGACAAGGAAAATAGGGCCAAAATAGAGGATGGAGATGCTTTTGCTGCTTTGTGCTATCTTCAAGCTAAGTATGATATACCTAAGGCAGTTGTTACCAATGGGGATGGTGCCATGCGTGAAGCTATAAGATCTGTGTTTCCAGATTCTATCCACAGGTTGTGTTCATGGCATCTTCACCAAAATGCTTGTGAGAATGTCAAGAATCCGAAATTTTTGGAAGATTTTAAGAAGTTAATTTATGCCAATTTTACTCCTGAGAAGTTTGAGCAAGAATGGGTACATGTCATTGAGAAACCTGGTCTGAGCAACAATAGGCACAATGAATTAGCTTCTGATTTTAAATCTACATACACCCAGCCAGTTCTTACAACTGTTTTGGAAAAGTATGAAGTTCATGCCTGTAATGTGTACACCAGGAATAAGTTTTTTGAAATTAGAAAGGAAATTGAGAAAGTTGATGCATTGAATATGATTGAAAGGTCTGAGGTAGGTAATATTGTGACAGTGAAGATGAACAAATTTGGACGTCCTGATTCTGTATATGTTGTTCTAATTGATAAGTCTGTTGGGAAGTTTGTATGTGATTGTCGGTTATTTGAGTCATGTGGCTTACCATGTTCACATATTTTTTGTGCTATGAAGCACGAGCAAGTAGAGTTAATTCCCCCTTCACTGATCTGCAAAAGGTGGACTAAGTTTGCTAAGGTTGATTATATATCTGCAATTTATGTTGATGAAGGTGATACGACCAAGAAGGAAGTGTTGAGGTTTGGTGTTGTGGGTGCTGCTTGTAATAGGCTTAACAAGGCTGCACATAAAAATCCTCATAATTTTGTGAAAAACATTGAGGCCATCCATCAATTAGCAGATCAAATGGAAAGGCAAGATGGGGTTGATGTGAACATTGTTGATATATCAAGGGTTATCCGTGATCCAACTATTGTTAAAACTAAAGGTGCACCCCGTAAGAGTAAGAAAAATATGAAAAGAAGGAAACGCTCTTATTGTAAGTGTGCAGGGCACACAATCAGGACATGTTCCAAGTTCTCAACTCGAGATCAGCTTCAAATTGTAGAAGAAGAGGAGTCTTCAGTTGAGAGTGATGGAGAACAAGAGATGTAA 1683 0.3773 MMEDKGNRVNEGEGEDVNNLKSPDEENACSGEVVPDVFKSISELTDDDIRMLEFDSELDAYNFYCEYAKFKGEKSEKHLNRTNRIREDKAITRTNCLARLRLYLDNNNNSGKWRVGMFEPQHNHELTPANMVHLMPAYRGLSAADKAQVNSLHLYGVRTCHIMRLIMGQKGGHSDLGFCKKDLYNHIDKENRAKIEDGDAFAALCYLQAKYDIPKAVVTNGDGAMREAIRSVFPDSIHRLCSWHLHQNACENVKNPKFLEDFKKLIYANFTPEKFEQEWVHVIEKPGLSNNRHNELASDFKSTYTQPVLTTVLEKYEVHACNVYTRNKFFEIRKEIEKVDALNMIERSEVGNIVTVKMNKFGRPDSVYVVLIDKSVGKFVCDCRLFESCGLPCSHIFCAMKHEQVELIPPSLICKRWTKFAKVDYISAIYVDEGDTTKKEVLRFGVVGAACNRLNKAAHKNPHNFVKNIEAIHQLADQMERQDGVDVNIVDISRVIRDPTIVKTKGAPRKSKKNMKRRKRSYCKCAGHTIRTCSKFSTRDQLQIVEEEESSVESDGEQEM 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi301g00046 560 MobiDBLite consensus disorder prediction 1 29 - -
Sebi301g00046 560 PANTHER OS01G0519700 PROTEIN 70 207 - -
Sebi301g00046 560 ProSiteProfiles Zinc finger SWIM-type profile. 368 404 IPR007527 GO:0008270
Sebi301g00046 560 SMART 26again6 379 406 IPR006564 GO:0008270
Sebi301g00046 560 MobiDBLite consensus disorder prediction 1 22 - -
Sebi301g00046 560 Pfam FAR1 DNA-binding domain 60 127 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi301g00046 Sebi-Chr301 1093404 1095639 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi301g00046 FAR1 9.6e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi301g00046 - - ahf:112776551 282.337