Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi301g00037 ATGGTCAAAGCAGTGGCAACAGAAGCACAAACCACATCTGCAAACCCTGCTGGCATGGATTTGGATTTACCGGTTGATCCAAATGAACCCACATACTGCTTTTGTAACCAAGTTAGCTATGGAGAAATGGTTGCCTGCGATAATCCTGATTGCAAAATAGAGTGGTTTCATTTTGGTTGTGTTGGTCTGAAAGAACATCCAAAAGGAAAATGGTACTGTTCAAATTGTGCAGCAACAAGAAATCGTCGGAGAGGGCCTTACAACTTTGCTTCTGTAGCTGTCATTGTTTGGCAAAATTTACAAATTTCCAATGACTTTGTCATTTTAGTCTGTGGTACTGAGCCATCGAATGGCTCTCCTCTTCCATTATAG 372 0.414 MVKAVATEAQTTSANPAGMDLDLPVDPNEPTYCFCNQVSYGEMVACDNPDCKIEWFHFGCVGLKEHPKGKWYCSNCAATRNRRRGPYNFASVAVIVWQNLQISNDFVILVCGTEPSNGSPLPL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi301g00037 123 CDD PHD_Yng1p_like 32 78 - -
Sebi301g00037 123 ProSitePatterns Zinc finger PHD-type signature. 33 76 IPR019786 -
Sebi301g00037 123 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 80 IPR013083 -
Sebi301g00037 123 SUPERFAMILY FYVE/PHD zinc finger 21 79 IPR011011 -
Sebi301g00037 123 FunFam Inhibitor of growth 2b 24 80 - -
Sebi301g00037 123 SMART PHD_3 32 77 IPR001965 -
Sebi301g00037 123 ProSiteProfiles Zinc finger PHD-type profile. 30 79 IPR019787 -
Sebi301g00037 123 PANTHER INHIBITOR OF GROWTH PROTEIN 9 80 IPR028651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi301g00037 Sebi-Chr301 895358 895904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi301g00037 21 80 PHD Transcription Factor Family AT5G12400 38.710 1.58e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi301g00037 - - cam:101508756 174.481