Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi300g00040 | ATGGAGTTTGACAATGAGTGTCCTTACTATTCCTCTTCACCATCTTCCACTTCTTCTCCAAGCCAACTCTCACCAAATTCTCAATCAGTGGTGGGGGTGCAGCAGCAGCAGGCACAAAGCTCCTCTCACAAGAGAAAAGCAGGAAGAAAGAAGTTCAAGGAAACAAGGCACCCAGTGTATAGAGGTGTTCGGCAGAGAAACGGAAATAGATGGGTGTGTGAAGTGAGGGAACCAAACAAGAAATCAAGGATATGGCTTGGGAGTTACCCTACGCCAGAAATGGCAGCTAGGGCACATGACGTGGCTGTCCTAGCACTTAAGGGAACCTCAGCAGTGTTCAATTTCCCTGATTCAGCTTCTCTTCTTCCAGTTGCAAGGTCTTGTTCAGCTCTAGATATAAGAGAAGCTGCATCAAAAGCCGCATATGCACAGGATCAGGCTTTTCCACCAACCACCCCTTCTTCTTCCTCTTCTGTTAATAATAACAATTTATTCGTGGAAACAAAAAGGGTAGATGATATTGGTGTTATTAAAAGCCCATCTTCTTCGACAGAAATGTTTTTTGATGAGGAAGCGTTGTATAATATGCCGGGTCTTTTAGATAGTATGGCGGAGGGTTTGCTTATTACGCCACCATCCATGAAGAGAGCATTTGATTGGGATGATGTTGATTATGAAACGGACCTAACTCTATGGACTGACTGA | 705 | 0.4426 | MEFDNECPYYSSSPSSTSSPSQLSPNSQSVVGVQQQQAQSSSHKRKAGRKKFKETRHPVYRGVRQRNGNRWVCEVREPNKKSRIWLGSYPTPEMAARAHDVAVLALKGTSAVFNFPDSASLLPVARSCSALDIREAASKAAYAQDQAFPPTTPSSSSSVNNNNLFVETKRVDDIGVIKSPSSSTEMFFDEEALYNMPGLLDSMAEGLLITPPSMKRAFDWDDVDYETDLTLWTD | 234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi300g00040 | 234 | CDD | AP2 | 60 | 118 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi300g00040 | 234 | Gene3D | AP2/ERF domain | 59 | 117 | IPR036955 | GO:0003700|GO:0006355 | |
Sebi300g00040 | 234 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Sebi300g00040 | 234 | SMART | rav1_2 | 59 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi300g00040 | 234 | MobiDBLite | consensus disorder prediction | 43 | 57 | - | - | |
Sebi300g00040 | 234 | MobiDBLite | consensus disorder prediction | 8 | 42 | - | - | |
Sebi300g00040 | 234 | FunFam | Ethylene-responsive transcription factor 2 | 58 | 117 | - | - | |
Sebi300g00040 | 234 | PRINTS | Ethylene responsive element binding protein signature | 60 | 71 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi300g00040 | 234 | PRINTS | Ethylene responsive element binding protein signature | 82 | 98 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi300g00040 | 234 | ProSiteProfiles | AP2/ERF domain profile. | 59 | 116 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi300g00040 | 234 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D | 12 | 233 | IPR045277 | GO:0003700 | |
Sebi300g00040 | 234 | SUPERFAMILY | DNA-binding domain | 59 | 118 | IPR016177 | GO:0003677 | |
Sebi300g00040 | 234 | Pfam | AP2 domain | 58 | 108 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi300g00040 | Sebi-Chr300 | 687298 | 688002 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi300g00040 | 8 | 233 | AP2-EREBP Transcription Factor Family | AT5G51990 | 45.374 | 3.46e-57 | 179 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Sebi300g00040 | AP2 | 5.6e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi300g00040 | - | - | gmx:100816109 | 265.774 |