Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi300g00015 ATGTATGTAACGTGTGCTGAGGTTAAGGTTGGGGATTCTGTTAAGGTAGACCCAAGCGAATTTGAGGCATGCATACACCTTTCTCAGGCGGCACTTGGTGAGGCCAAGAAAGACAAAGCAAGTGAACCTGTGGTTCTTTACTTGAAAGTTGGTGACCAGAAATTTGTTTTGGGAACCCTTTCCAGGGACAAAATTCCCCAGATATCTCTTGAAATAGTTCTGGACAAGGAGTTTGAGCTTTCCCACAATTCTAAAACTGCCAGTGTCCATTTCTGTGGATACAAAGCATATTATGCGGTATTGTGGCTCTGTCTTTCATTTTTCCTTAACTTTTGGTGTGTTTCTGCTGGCACTAGTGAGGAGGATGACTTTACAGATAGCGATGAAGATATCCCATTGGTGAATGCAGAGAATGGAAAACCTGAAACAAAAGCTCAAGCCTTAAAGGTTCCTGGGTCTAAAAAGCCTGATGCCAAGAGTGGTGCATCAGCTAAACAAGTTAAGGTGGATGTGGGAAAGAAGAGGCCCAATGACTCTGCATCAAAAACTCCAGTTTCTACCAAGAAAGCAAAGAATGCTACTCCTGAAAAGACTGATGGTAAGAAATCTGGACACACAGCAACTCCTCACCCTATGAAGAAAGGTGGAAAGACTCCCAACAGTGAATCCAAGGACCAGACTCCCAAGTCTGCTGGACAAATTTCTTGCAAAAGTTGTAGCAAGACATTCAACTCTGAAGCTGGTTTTCAACAACATAACAAGGCTAAGCATGGTGGTCAGTGA 783 0.433 MYVTCAEVKVGDSVKVDPSEFEACIHLSQAALGEAKKDKASEPVVLYLKVGDQKFVLGTLSRDKIPQISLEIVLDKEFELSHNSKTASVHFCGYKAYYAVLWLCLSFFLNFWCVSAGTSEEDDFTDSDEDIPLVNAENGKPETKAQALKVPGSKKPDAKSGASAKQVKVDVGKKRPNDSASKTPVSTKKAKNATPEKTDGKKSGHTATPHPMKKGGKTPNSESKDQTPKSAGQISCKSCSKTFNSEAGFQQHNKAKHGGQ 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi300g00015 260 MobiDBLite consensus disorder prediction 122 237 - -
Sebi300g00015 260 Gene3D Nucleoplasmin core domain 3 98 - -
Sebi300g00015 260 MobiDBLite consensus disorder prediction 192 206 - -
Sebi300g00015 260 Pfam Nucleoplasmin-like domain 6 94 IPR041232 -
Sebi300g00015 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 234 260 IPR013087 -
Sebi300g00015 260 ProSitePatterns Zinc finger C2H2 type domain signature. 236 257 IPR013087 -
Sebi300g00015 260 MobiDBLite consensus disorder prediction 221 237 - -
Sebi300g00015 260 FunFam Histone deacetylase HDT1 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi300g00015 Sebi-Chr300 205952 208138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi300g00015 1 95 C2H2 Transcription Factor Family AT5G03740 47.368 3.00e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi300g00015 - - lang:109358867 300.056