Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00197 ATGTACGGATTCGAAGCTCTCACCTTCAACATCCACGGCGGTTACCTTGAGGCCATCGTCAGGGGCCACCGCGCCGGTTTGCTCACCACCGCCGATTACAACAATCTCTGCCAATGCGAATCCCTCGATGACATCAAGATGCACCTTTCCGCCACCGAGTATGGCCCTTACCTCCAAAACGAGCCTTCTCCATTGCATACCACCACAATTGTGGAGAAATGTACTCTTAAGCTGGTTGATGATTACAAGCACATGCTATATGGTCACATGATAGACAATGTTGTTTTGATTGTTACTGGAACCTTGCATGAGAGAGATGTTCAAGAACTACTTGAAAAATGCCATCCACTGGGCATGTTTGACAGTATTGCTACTCTGGCAGTTGCTCAGAATATGCGGGAGCTTTACAGGCTGGTTCTTGTTGACACTCCTCTGGCTCCATATTTTTCTGAGTGCATTACATCAGAGGACTTGGATGATATGAACATTGAAATAATGAGGAACACTCTTTACAAAGCATACCTTGAAGACTTTTACAAATTTTGTCAGAAACTTGGTGGTGCCACTGCTGAGATAATGTCAGACCTTCTAGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATAAATAGCATTGGTACTGAGCTTACCAGAGATGACCGTAGAAAACTGTACTCTAACTTTGGTTTGCTCTATCCATATGGTCATGAGGAACTTGCTGTCTGTGAGGACATAGATCAGGTTCGTGGTGTTATGGAAAAGTACCCCCCTTATCAATCTATTTTTGCTAAGTTATCTTATGGAGAGAGCCAGATGCTTGACAAGGCATTCTATGAGGAGGAGGTGAAGAGGCTTTGCCTGGCGTTTGAGCAACAGTTTCACTATGCTGTTTTCTTCGCATATATGAGGTTAAGGGAACAGGAAATCAGGAACCTAATGTGGATTTCAGAATGTGTGGCTCAGAATCAGAAATCCAGAGTTCATGACAGTGTTGTCTTCATATTTTAG 1011 0.4372 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCESLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00197 336 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 320 IPR044911 -
Sebi2g00197 336 FunFam V-type proton ATPase subunit 77 190 - -
Sebi2g00197 336 SUPERFAMILY V-type ATP synthase subunit C 14 334 IPR036079 -
Sebi2g00197 336 Gene3D - 88 180 IPR035067 -
Sebi2g00197 336 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 336 IPR016727 GO:0033179|GO:0046961|GO:1902600
Sebi2g00197 336 PIRSF V-ATP_synth_D 4 335 IPR016727 GO:0033179|GO:0046961|GO:1902600
Sebi2g00197 336 Gene3D - 191 294 IPR035067 -
Sebi2g00197 336 Pfam ATP synthase (C/AC39) subunit 83 329 IPR002843 GO:0046961
Sebi2g00197 336 Pfam ATP synthase (C/AC39) subunit 16 85 IPR002843 GO:0046961
Sebi2g00197 336 FunFam V-type proton ATPase subunit 191 294 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi2g00197 1 336 Primary Pumps ATPases(2) AT3G28710 91.453 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00197 K02146 - gmx:100800553 665.996