Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00190 ATGGCAGAAGGTGAGCTCCAAGGAGCAAGGTGTGTCAAGAGACGACGAAATACTGGCAATGATATTGATAACCAAAATCAGAAGCTGTCACAGCAACAAGTTGGTGAAAATTCTACAACCAATACTAACTCTACAAAGAGAAGCTCAAGATTTCGTGGAGTTAGCAGGCATAGATGGACTGGTCGATTTGAAGCACACTTGTGGGACAAGCTATCTTGGAACATAACACAAAAGAAGAAAGGGAAGCAAGGGGCTTATGATGAAGAAGAATCTGCTGCCAGAGCATATGATTTAGCAGCACTTAAGTATTGGGGAACATCTACTTTCACCAATTTTCCGATATCAGATTACGAGAATGAGATAGAAATAATGCAGACTATGACCAAAGAGGAGTACTTGGCCACTTTAAGGAGGAAGAGCAGTGGCTTTTCAAGAGGCGTCTCAAAGTATAGGGGTGTTGCAAGGCACCACCATAATGGTAGATGGGAAGCAAGGATAGGAAGGGTTTTTGGAAACAAATACCTCTACCTTGGCACCTACAGTACCCAAGAGGAAGCTGCTCGTGCTTATGATATAGCAGCCATTGAGTATAGAGGGATTCATGCTGTAACGAATTTTGATTTAAGTACTTACATAAAATGGTTAAAGCCTAAAAGAGGAAGCACCCCATATACAAAACTTGAATCACAGACAGTATTGTTAGAGTCTCAAACAGTGGCTTCCCCACCTAACAGAACTCTGATAGAAGAATCAAAGTCCTTGGCACTTCACAACAGTATTTTCAGTAGAGATTACCTACATTTCCCTGAAAAGCAAGAAGTATTTGGAAACAAAACCTACCAATTCTCAAGCAATAAGTCATCTTCTCCCACTGCACTTGGCCTTCTTCTCCGCTCTTCTCTATTCCGAGAATTAGTTGAAAAGAACTCAAATGTGTCTGAAGATGAAACTGATGGGGAAGTCACAAAGGAGCAAAACCAACAGATAGCTAGTGATGATGAGCTTGGTGGAATCTTCTATCATGGCATTGGTGATATCCCATTTGTCAGTGATCCTAACAGATACAACTTAGAATTGCAAGAAAGAGACTTGCATTCAATATTTTGA 1107 0.4083 MAEGELQGARCVKRRRNTGNDIDNQNQKLSQQQVGENSTTNTNSTKRSSRFRGVSRHRWTGRFEAHLWDKLSWNITQKKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYENEIEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIKWLKPKRGSTPYTKLESQTVLLESQTVASPPNRTLIEESKSLALHNSIFSRDYLHFPEKQEVFGNKTYQFSSNKSSSPTALGLLLRSSLFRELVEKNSNVSEDETDGEVTKEQNQQIASDDELGGIFYHGIGDIPFVSDPNRYNLELQERDLHSIF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00190 368 ProSiteProfiles AP2/ERF domain profile. 149 207 IPR001471 GO:0003700|GO:0006355
Sebi2g00190 368 MobiDBLite consensus disorder prediction 22 49 - -
Sebi2g00190 368 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 33 277 - -
Sebi2g00190 368 FunFam AP2-like ethylene-responsive transcription factor 148 209 - -
Sebi2g00190 368 SUPERFAMILY DNA-binding domain 148 209 IPR016177 GO:0003677
Sebi2g00190 368 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Sebi2g00190 368 PRINTS Ethylene responsive element binding protein signature 189 209 IPR001471 GO:0003700|GO:0006355
Sebi2g00190 368 Pfam AP2 domain 49 105 IPR001471 GO:0003700|GO:0006355
Sebi2g00190 368 Pfam AP2 domain 148 199 IPR001471 GO:0003700|GO:0006355
Sebi2g00190 368 MobiDBLite consensus disorder prediction 1 53 - -
Sebi2g00190 368 CDD AP2 49 115 IPR001471 GO:0003700|GO:0006355
Sebi2g00190 368 Gene3D AP2/ERF domain 148 209 IPR036955 GO:0003700|GO:0006355
Sebi2g00190 368 Gene3D AP2/ERF domain 49 115 IPR036955 GO:0003700|GO:0006355
Sebi2g00190 368 SUPERFAMILY DNA-binding domain 49 115 IPR016177 GO:0003677
Sebi2g00190 368 CDD AP2 148 209 IPR001471 GO:0003700|GO:0006355
Sebi2g00190 368 ProSiteProfiles AP2/ERF domain profile. 50 113 IPR001471 GO:0003700|GO:0006355
Sebi2g00190 368 SMART rav1_2 149 213 IPR001471 GO:0003700|GO:0006355
Sebi2g00190 368 SMART rav1_2 50 119 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00190 Sebi-Chr2 4209763 4211845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi2g00190 46 242 AP2-EREBP Transcription Factor Family AT5G57390 58.879 1.20e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Sebi2g00190 AP2 1.3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00190 - - gmx:100792612 582.408