Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi2g00189 | ATGGAAGAGCATGAAAAAGAAGTAGGGTTATATTCAAATAGCACAAGGAGAGAATTAAGGCAAAAGAAAAAATACGGAGGACCATGCATAGCCACCAACCCAATTGACCGTTGTTGGAGGTGTAGGAAAAATTGGGCCACTGACCGCCAAAGGTTGGCAAAATGTGGCAAAGGTTTCGGAAGAAGGGCCGTCGGAGGACTCGGTGGCAGGATCTACGTCGTCACCGACGAATCCGACAACGACATGGTAAACCCTAAACCTGGGACTCTAAGGTATGGTGCCGTACAAAAAGGACCACTTTGGATCATTTTTGCACGTAGCATGGTGATTAAATTGAGGCAAGAATTGTTGGTCTCTTCTGACAAGACCATAGATGGTCGTGGAGCCAATGTTCAAATACGAGATGGTGCTGGCATTACCATGCAATTTGTCAACAATGTTATCATCCATGGCCTTCACATAAAAAAAGTTAGGTCTGCAAATGGTGGTATGATTAAGGATTCTTGGAACCATGTTGGACTAAGAACAAGGAGTGATGGTGATGCCATCTCTATTTTTGGCTCCTCAAACATTTGGATTGATCACCTTTCCTTGTCTGATTGTGAGGATGGTCTTGTTGATGTTATTCAGGGCTCTACCGCAGTCACCATCTCAAATTGCCACATGACCAAACACAATGATGTGATGTTGTTTGGGGCTAGTGATTCCTACAATGGGGACAAGATTATGCAAATTACAGTGGCATTCAACCATTTTGGTCAAGGATTGATTCAGAGAATGCCAAGATGTAGATGGGGTTTCTTCCATGTTTTGAACAATGACTACACTCATTGGTTGATGTATGCAATTGGTGGAAGCTCAGGGCCGACAATTCTTAGCCAGGGAAATCGTTTCATTGCACCAAACAACAATGCTGCTAAGGAGATCACACATAGAGACTACACAACACCAGCTGTGTGGTCCAGATGGCAATGGAGATCAGAGAATGACTTGTTCATGAATGGTGCAAAGTTTGTTGCCTCTGGAGCACCCATTGGTAAACTTCCATTCAACAAAGGTTTCCTAATGAAGCCAAGACCTGGATATCAAGCCAACAGGTTGACAAGGTTTGCTGGGACACTCAGTTGCAGGGTGGGTAGGCCTTGCTAG | 1149 | 0.443 | MEEHEKEVGLYSNSTRRELRQKKKYGGPCIATNPIDRCWRCRKNWATDRQRLAKCGKGFGRRAVGGLGGRIYVVTDESDNDMVNPKPGTLRYGAVQKGPLWIIFARSMVIKLRQELLVSSDKTIDGRGANVQIRDGAGITMQFVNNVIIHGLHIKKVRSANGGMIKDSWNHVGLRTRSDGDAISIFGSSNIWIDHLSLSDCEDGLVDVIQGSTAVTISNCHMTKHNDVMLFGASDSYNGDKIMQITVAFNHFGQGLIQRMPRCRWGFFHVLNNDYTHWLMYAIGGSSGPTILSQGNRFIAPNNNAAKEITHRDYTTPAVWSRWQWRSENDLFMNGAKFVASGAPIGKLPFNKGFLMKPRPGYQANRLTRFAGTLSCRVGRPC | 382 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi2g00189 | 382 | PRINTS | Pollen allergen Amb family signature | 79 | 104 | IPR018082 | - | |
Sebi2g00189 | 382 | PRINTS | Pollen allergen Amb family signature | 115 | 131 | IPR018082 | - | |
Sebi2g00189 | 382 | PRINTS | Pollen allergen Amb family signature | 281 | 300 | IPR018082 | - | |
Sebi2g00189 | 382 | PRINTS | Pollen allergen Amb family signature | 55 | 72 | IPR018082 | - | |
Sebi2g00189 | 382 | PRINTS | Pollen allergen Amb family signature | 323 | 347 | IPR018082 | - | |
Sebi2g00189 | 382 | PRINTS | Pollen allergen Amb family signature | 179 | 200 | IPR018082 | - | |
Sebi2g00189 | 382 | PRINTS | Pollen allergen Amb family signature | 259 | 278 | IPR018082 | - | |
Sebi2g00189 | 382 | PRINTS | Pollen allergen Amb family signature | 353 | 376 | IPR018082 | - | |
Sebi2g00189 | 382 | Pfam | Pectate lyase | 113 | 298 | IPR002022 | - | |
Sebi2g00189 | 382 | SMART | amb_all | 107 | 304 | IPR002022 | - | |
Sebi2g00189 | 382 | SUPERFAMILY | Pectin lyase-like | 14 | 376 | IPR011050 | - | |
Sebi2g00189 | 382 | PANTHER | PECTATE LYASE 18-RELATED | 12 | 380 | IPR045032 | GO:0030570 | |
Sebi2g00189 | 382 | Gene3D | - | 32 | 375 | IPR012334 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi2g00189 | Sebi-Chr2 | 4193320 | 4194765 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi2g00189 | 8 | 382 | Polysaccharide Lyase | AT5G15110 | 60.105 | 3.52e-175 | 494 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi2g00189 | K01728 | - | gmx:100780236 | 632.098 |