Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi2g00188 | ATGACAGGAATTAAGGTTACCTTTATTATCCTCTTGGTGGCTTTTGCAATTACTATTCCACGTCTTGAGGCTGGCATTGCTGAGTTTGATGATTTTCTCAAAGCACAAGCTGATGAGGCACATGAAATTGCTCTTAAGTCCTATGTGCCCAACCCTGAAAACATGAAAGACGAGCTTAATGTAAATGTTCATTTGGGGGAACCTGAGACACATGTGGATGAAAAGCAAGATCATGACAAGGTTACAAATGCATAA | 255 | 0.4 | MTGIKVTFIILLVAFAITIPRLEAGIAEFDDFLKAQADEAHEIALKSYVPNPENMKDELNVNVHLGEPETHVDEKQDHDKVTNA | 84 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi2g00188 | 84 | Pfam | Pectate lyase, N terminus | 26 | 65 | IPR007524 | GO:0030570 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi2g00188 | Sebi-Chr2 | 4184798 | 4185052 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi2g00188 | 8 | 79 | Polysaccharide Lyase | AT2G02720 | 29.167 | 1.38e-08 | 48.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi2g00188 | - | K01728 | gmx:100780236 | 90.1225 |