Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00184 ATGGGGTTTAGGAATAATGCAATTCAGGCAGGGAGTTTGGATGTGGGAAAGTCAAAGGGAAGGATGAATAGGGATGTTGCTGACGAGGAGATTGGATGTTGTGTTAATTTTAGTTTCATTGGGAGGTGTATACCTTCAAGATCAAAGGTTAATAGCTCCATAAGTGGCATCAGTGCTCACAGTGTGGAAAAAACATCTGCATCTGAAAAAAGCAAAACGGAAACAAGTGCTCCCCCAGGGTCCTCTACAACAACTAGTAATATAGGAAGTATCCCATCAACTCCAAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTCACATTCAATGAGCTTAAGTTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGCGAGGGAGGTTTTGGTTGTGTCTTCAAGGGTTGGATTGAGGAGAATGGAACTGCACCTGTGAAACCAGGTACTGGGCTTACTGTCGCAGTCAAGACCCTCAACCATGATGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAGTTAAACATTCTCGGTGACCTTGTTCATCCGAATCTGGTTAAATTGATTGGTTTCTGTATTGAAGATGACCAAAGATTGTTGGTTTATGAGTTTATGCCTCGTGGAAGTTTGGAGAACCACCTCTTCAGAAGTTCTAGATTGCTAATGGTTTCTGGGATTGCATGTAAAATTGGTGTCTTATGTCTTGATATTATGGAATAA 729 0.4184 MGFRNNAIQAGSLDVGKSKGRMNRDVADEEIGCCVNFSFIGRCIPSRSKVNSSISGISAHSVEKTSASEKSKTETSAPPGSSTTTSNIGSIPSTPKFSEELKVSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNILGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRSSRLLMVSGIACKIGVLCLDIME 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00184 242 Gene3D Phosphorylase Kinase; domain 1 94 207 - -
Sebi2g00184 242 ProSiteProfiles Protein kinase domain profile. 122 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi2g00184 242 MobiDBLite consensus disorder prediction 71 93 - -
Sebi2g00184 242 FunFam Serine/threonine-protein kinase BIK1 90 207 - -
Sebi2g00184 242 SUPERFAMILY Protein kinase-like (PK-like) 91 222 IPR011009 -
Sebi2g00184 242 Pfam Protein tyrosine and serine/threonine kinase 126 221 IPR001245 GO:0004672|GO:0006468
Sebi2g00184 242 PANTHER OS01G0588500 PROTEIN-RELATED 72 224 - -
Sebi2g00184 242 MobiDBLite consensus disorder prediction 61 93 - -
Sebi2g00184 242 ProSitePatterns Protein kinases ATP-binding region signature. 128 160 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00184 Sebi-Chr2 4143127 4145471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi2g00184 80 218 Glycoside Hydrolase AT3G07070 45.638 5.73e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi2g00184 PK_Tyr_Ser-Thr 5.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00184 - - gmx:100305393 385.956