Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00154 ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTCCTGGTTGAGGTATCTAGTCATTCCAATGCACACACAGCTGCAATTAGAGAAGCTGGTCAGAGGCTAATTGGGCAGGATGTTTCAAGTGTGCGTGGGATTTCAGTGAGAGATATGAATCAATTTTCAAAAGCGCGGGATGGCCCTATGACACGCCTGGCCTCCATTAGAGAAGTGGCTCAGTTGTCAAATGCACGAATAGTTTTGGTAAGAGAGAATATGGGATTTGATACACGATCCTCTCAAGAACCGGTCTCCCCTGCACCTACAAGAACATGGAAAGGAAAGGCCTCTTTGCCAGAACCTGAAGACCTTATGTCTGATATTGAGACATTGAAGAGCAGCAAGGATTCTTTTGGGGACACTGGTTCTGGTTCATTTTCTGGTGCTAGTCATCCCCCAGAACCTGTTGATTTTGATCTTATGAGAACGGTTTATGTACCAATAGGTCAAAACAAATCTGAGGCTGGATGCTTAATGAAGAGCATGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTCGTGTTCCCACTAAGAAACCAAGCCTTGCTGTTCTTTCTCCAGCAGAAAGTCTGGTTGAAGAATCAAATGACATGGGGAATTTATCCTCACCATTTTCAGGTGCTCGTGCGTCACAGAATACTGATAACTCTTTCGTTCCCCTTGATTCTGAGGAGAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGCAATGTCAGTCCACATAGTAGTATTGATAGTACTAGTGTTGTAAGAACATTGAGCATTGCTAATAGTTGTGCAAGTTCATATCGCAGTGATGCAATCACTAGTGATGGCATGCTTAGTTTAGACAGGAATTTTGATAGTACTAAAGGAAGTGTAAGGGGGGATTCACTTGAGAGTGCAAAAACTAGTGCCAGTCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATCACTGGTAGTGCCAATAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCAATCAGGGCACGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTTGGCTGTGGCGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGTTATTTTGCAATGAAAGTGATGGACAAAGCATCCCTGGCAAGCAGAAAGAAGCTGACCAGAGCACAGACAGAAAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTGCCTACATTGTATACACATTTCGAGACTGATAGATTCTCCTGTTTGGTAATGGAATACTGTCCTGGGGGTGATCTACACACTTTAAGGCAACGACAACCTGGGAAACATTTCTCTGAGTACGCTGCACGGATGAAAGAAACAGGGAATATGGATATTTAA 1446 0.444 MERVAEPKVLPRSLPVLVEVSSHSNAHTAAIREAGQRLIGQDVSSVRGISVRDMNQFSKARDGPMTRLASIREVAQLSNARIVLVRENMGFDTRSSQEPVSPAPTRTWKGKASLPEPEDLMSDIETLKSSKDSFGDTGSGSFSGASHPPEPVDFDLMRTVYVPIGQNKSEAGCLMKSMSLKGPFLEDLSIRVPTKKPSLAVLSPAESLVEESNDMGNLSSPFSGARASQNTDNSFVPLDSEEKECVWDASLPPSGNVSPHSSIDSTSVVRTLSIANSCASSYRSDAITSDGMLSLDRNFDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARMKETGNMDI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00154 481 PANTHER FLIPPASE KINASE 1-RELATED 117 472 - -
Sebi2g00154 481 ProSiteProfiles Protein kinase domain profile. 369 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi2g00154 481 SMART serkin_6 369 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi2g00154 481 MobiDBLite consensus disorder prediction 302 346 - -
Sebi2g00154 481 FunFam Serine/threonine-protein kinase D6PK-like 367 452 - -
Sebi2g00154 481 Gene3D Phosphorylase Kinase; domain 1 363 480 - -
Sebi2g00154 481 Pfam Protein kinase domain 370 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi2g00154 481 MobiDBLite consensus disorder prediction 112 130 - -
Sebi2g00154 481 MobiDBLite consensus disorder prediction 302 342 - -
Sebi2g00154 481 MobiDBLite consensus disorder prediction 212 231 - -
Sebi2g00154 481 MobiDBLite consensus disorder prediction 93 149 - -
Sebi2g00154 481 SUPERFAMILY Protein kinase-like (PK-like) 351 472 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00154 Sebi-Chr2 3471727 3473416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi2g00154 1 473 AGC Kinase Gene Family AT2G44830 60.499 5.72e-172 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi2g00154 Pkinase 1.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00154 - - gmx:100800019 785.023