Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00153 ATGCTTGGAGTTGTGTATAGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTTGATCTCTCTCTTAGATGTGCTGTTTCACCCACCCTTATTAGAACCTACGACGGTGACCCTTCTAAACGGGCTGGTGGTGCATTTTGTGTCCAACCAGCTTGCATTGAGCCTTCATCAGTATGCATCCAGCCTTCCTGTTTCATGCCGCGGCTCTTCCCTCAGAAAAATAAGAAGTCGTCAAGGAAGTCGAAAGCTGAGCCTGGCCTGCCATCAGGCACACTTCCAGAGCTTGTTGCTGAGCCTACAACAGCGCGGTCTATGTCCTTTGTTGGCACACATGAATACCTTGCCCCTGAAATTATCAAAGGAGAGGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTGTTATATGGTAAAACCCCTTTCAAAGGATCAGGAAACCGTGCCACACTGTTCAATGTAGTAGGTCAGCAGCTCAGGTTTCCTGAATCACCAGCCACCAGTTATGCCAGCCGTGATCTGATCCGGGGGCTGCTGGTGAAGGAGCCACAACACCGGCTTGGGGTGAAGAGGGGTGCAACTGAGATCAAACAGCACCCTTTCTTTGAAGGTGTGAATTGGGCATTGATTAGGTGCAGCACACCACCAGAAATTCCAAGACCAGTTGAAAGTGAGCTACCAGCTAAGTTTGAAGCAGTTGATACTGTTGGGGTTGGCAGCAATAATAGTAAGAAGATGGTAGGTGGTAATGATATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 837 0.4743 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTYDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRLFPQKNKKSSRKSKAEPGLPSGTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEIPRPVESELPAKFEAVDTVGVGSNNSKKMVGGNDMKSGGKYLDFEFF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00153 278 FunFam serine/threonine-protein kinase D6PK-like 111 234 - -
Sebi2g00153 278 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi2g00153 278 SUPERFAMILY Protein kinase-like (PK-like) 3 246 IPR011009 -
Sebi2g00153 278 PANTHER FLIPPASE KINASE 1-RELATED 1 239 - -
Sebi2g00153 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 4 16 IPR008271 GO:0004672|GO:0006468
Sebi2g00153 278 Pfam Protein kinase domain 113 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi2g00153 278 SMART serkin_6 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi2g00153 278 Gene3D Transferase(Phosphotransferase) domain 1 1 92 - -
Sebi2g00153 278 MobiDBLite consensus disorder prediction 84 103 - -
Sebi2g00153 278 Gene3D Transferase(Phosphotransferase) domain 1 111 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00153 Sebi-Chr2 3467337 3468173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi2g00153 1 278 AGC Kinase Gene Family AT2G44830 78.201 1.85e-151 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi2g00153 Pkinase 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00153 - - gmx:100800019 526.168