Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00139 ATGAATATGAATTCTGAAAATAATGAAGATGGTTTTCGTTTCTTGGTGGAGGATGAAGTTGGAGGTGTATTTGTAGTAGATGAAACTTGGCTTGACAAATGTGTAATTGAAGATGAAGGGGAAAATGATAATGATGAAGATGGGGATGTTGTCTTTGTTGATCATGATTGGGAAGATAGCAATGAGGGAGAAGGAAATGAAGATGAATTACAGGGGGAAACAAAATTAATGAACAATGAAGATGATATTCTGAATATGGGGGAGCTCAATTTGTTTAGTCCCCATGAAATTAAGAATTGGGAATTTGGTAATTTGGATGTGGCTTGCAAGTTCTATTTTGAATATGCAAAAGCCAATGGATTTAGTATACGCAAGGGCAGAACATTGAGGAATAAGAAGACCTTGGAGGTGTATCAGAAAGAATTTTTATGCTCCAGAGCCGGTACCCGTGAAGATAGGGGTCTTAGAATGGAAGATAGGGTTCGTGAGCCTAGAGCTGTAACTAGATGTAATTGTTCAGCTAAATTTGTAGTCCATGTGAACAAGTTATCTGGTCTATGGTTTTGTGTTTGCTTTGTTGATGAGCATAACCATGACCGATTAGGGGCAGTTCATTGCAGTATGCTTCCTGCCTATAGAAAAATGGGTGACAGTGATGTGGTACAAATGAACAACATGATTAAGGTTGGTATCAGGCCACCTAATATATTCAGTTCATTTGCTAGTCAGTCAGGAGGGTATGAGAAGATTGGGTTTAGTAAGAAAGACATGTATAACAAGATAAATGAGCAGCGGCGGAAGGTTTGTTCTGATGCTAAAGGCGCTGTCCAATTCCTTGGTGAGCTTCGACTGATTGATACTATGATGTATTTTGAACACACCGTTGATGCAGAAGGTAGGCTTCAACATCTATTTTGGAGTGATGGCATGAGTCAAGTGGATTACAAGATGTATGGGGAAGTGTTGGCATTTGATGCAACCTATGGTAAAAATAAGTACTTTATGCCACTAGTTGTTTTTTGTGGAGTTAATAACCACAATCGGAGCACAATATTTGCTGCTGCCATAATTGCAAACGAGACTGAGGAGACATACGTGTGGATTTTGGAGCAGTTTTCAAAAGCAATGAAAGAGTTCACAAAAGCGTCTGAGGATTGTATGCTTCGTTACTATGATATTGCGACATTTCAGAGAAAATGGAATGAAATTATAACAAAATTTGGTCTTGAAGAGAATCCTTGGGTTGTTGGTTTGTTTGAAAAGAGGACTATGTGGGCTACAGCTCATCTTAGGGGGAAATTCTTTGGTGGATTCAGAACAACTTCTAGGTGTGAGGGCTTGCATTCAGAGTTATCAAAGTTTGTGAGCTCTAGATACAATTTGAGTGATTTCCTATAG 1398 0.3877 MNMNSENNEDGFRFLVEDEVGGVFVVDETWLDKCVIEDEGENDNDEDGDVVFVDHDWEDSNEGEGNEDELQGETKLMNNEDDILNMGELNLFSPHEIKNWEFGNLDVACKFYFEYAKANGFSIRKGRTLRNKKTLEVYQKEFLCSRAGTREDRGLRMEDRVREPRAVTRCNCSAKFVVHVNKLSGLWFCVCFVDEHNHDRLGAVHCSMLPAYRKMGDSDVVQMNNMIKVGIRPPNIFSSFASQSGGYEKIGFSKKDMYNKINEQRRKVCSDAKGAVQFLGELRLIDTMMYFEHTVDAEGRLQHLFWSDGMSQVDYKMYGEVLAFDATYGKNKYFMPLVVFCGVNNHNRSTIFAAAIIANETEETYVWILEQFSKAMKEFTKASEDCMLRYYDIATFQRKWNEIITKFGLEENPWVVGLFEKRTMWATAHLRGKFFGGFRTTSRCEGLHSELSKFVSSRYNLSDFL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00139 465 Pfam FAR1 DNA-binding domain 110 199 IPR004330 -
Sebi2g00139 465 Pfam MULE transposase domain 321 388 IPR018289 -
Sebi2g00139 465 PANTHER OS01G0519700 PROTEIN 99 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00139 Sebi-Chr2 2975532 2977145 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi2g00139 FAR1 2.8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00139 - - tpra:123913749 446.817