Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00134 ATGGAACACATGTTCATGGTGATTCTAGCATACTGGCGGATTTTGTTCATATTTCTTTGTGTCATTCTAACACCTCAAGCTGCAGCTGAAGATAGTGAAGCAAATGCTCTGTTAAAGTGGAAAAACAGCTTTGAAAATCAAAGCCAAGCTGTATTGTCAACTTGGAAAGGTACTAATCCATGCAAATGGAAAGGAATTCAGTGTGACAAATCCAACTCTGTCTCTACAATAAATCTTGCAAATTATGGACTAAAAGGTACACTCCACACTCTCAGCTTCTCCTCATTCCCCAACCTCCTTATCCTAAATATCTTAAACAACTTCTTTCATGGGACCATTCCCCCACAAATTGGTAACTTGTCAAAAGTAAATGTTTTGAACTTTTCTTCAAATCCTCTTGATGGTTCCATCCCTCAAGAAATGTGGACATTAAGGACTTTGCATAGCCTTGATCTTTCCTTATGTAAACTGAGTGGAGAAATTCCTAATTCTATAGCAAACTTGTCCAACCTATCATTTCTAGATTTAGGTACCAACAAATTTTCTGGCTACATTCCTCCAGGGATAGGAAAATTGAACAAATTGGAGTATCTAGCTATTGCAGAAAATAACTTTTTTGGTACCATTCCTCAAGAAATTGGAATGTTGACAAAGCTTAGGCTTATGGATTTGTCACTGAACTCTCTCTCTGGTACTATCCCAAGAACAATAGGTAACATGAGCAATTTAAATAGGCTTGTCATTTCTAATAACACCCTTTTGTCTGGACCAATCCCATCTTCCTTATGGAACATGTCTAACTTGTCCTGGCTCCAGCTTTATGGCAATAGTCTTTCTGGATCAATACCATCTTCCATAGGAAACTTAGTCAATTTGAATATCCTTATACTTGAATCCAACCACTTTTCTGGACCCATTCCTTCCACTATTGGAAACTTGACAAAGCTCACTGAATTATACTTGGGTTTTAATAATTTTTCTGGATCAATTCCTGCCTCTATAGGAAATTTGATCAATCTGGACGTCCTCAGTCTCCAAGGAAACAATCTCTCTGGATCTATTCCTACCACAATTGGAAATTTGAAAAGGCTCACTGTCTTGGAACTATCCACCAACAAACTTAGTGGTAGCATTCCAAAGGTCTTGAATAACATTACAAACTGGTTATCCTTGTTATTATCTAAGAATGATTTTATTGGCCATTTGCCATCTCAAATCTGCTCTGGTGGGTCACTAGTGTACTTCAATGCTTATGAAAACCATTTAACAGGTCCAATACCAACAAGCTTGAAGAACTGTTCTAGTATTGTTAGACTTAGGCTTGAGGGCAACCAATTGGAAGGAGATATAGCACAAGATTTTGGTGTATATCCAAATTTGGAATACATTGATCTTAGTGACAATAAATTTCATGGTCACATTTCACCAAATTGGGGGAAGTGCCCTAAACTTAATAGCTTGATGATATCCAACAATAATATTTCTGGTGGTATACCAGTAGAGCTTGTTGAGGCAACCAAGCTAGGTAGGCTTCATCTTTCTTCAAACCACTTGACTGGGAAGGTTCCAAAGCAATTAGGAAACTTGAAATCATTAGTTGAACTCAAGACTAACAACAATAAATTTTCAGGATACATTCCCACAGAAATTGGACTGCTGCAAAAACTTGAAATTTTGGATCTAGGAGGAAATGAGTTGAGTGGCACAATACCAAAAGAAGTCATGATGTTACCCAAGTTAAGGAACTTGAATTTGAGCATAAACAAACTTGAGGGAAGCATTCCCTCTCAGTTTGGACTGTCTCTGGAATCTCTTGATCTTAGTGGCAATTTTTTGAATGGAAAAATACCAACAAGTCTTGGAAGTTTGAAACACTTGTCAATGTTTAATCTCTCACATAATGGTCTTTCTGGCACCATTCCTCCTACTTTTAGTGGGACATTGGATTTTGTTAACATATCAGATAACAGGTTAGAAGGGCCACTTCCAAACAGTCCAGCTTTTCTTCATGCTCCTTTTGAATCATTGAAAAATAACAAAGGCTTGTGTGGTAATGTCACAGGATTGACTCCTTGCCCAACTAACAATAGTAAAAAAAAGCAACAAAGTCATCTTGTGGCTACAGAGAATTTTGATGACAAATATCTCATTGGAGTAGGAAGTCAAGGAAATGTTTACAAGGCAGAGTTGGCTGCAGGTTTGGTTGTTGCTGTGAAGAAACTTCATTCAGTAACAGATGAGGAAATGTCAAATTTCAGTTCAAGGTTCTCATTTTTGGTTTATAAGTTCTTGGAAGGAGGTAGCTTGGACCAAATACTAAACAATGACACACAAGCATTTGCATTTGATTGGGAAAAGAGAGTGAATGTTGTCAAAGGTGTGGCTAATGCTTTGTCCTATTTGCATCATGATTGCTCACCTCCTATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTTTAGATCTTGAATATGAAGCTCATGTCTCTGACTTTGGGACAGCTAAGTTTCTGAAGCCTGGTTCACATAGTTGGACCCCATTTGCAGGAACCTTTGGGTATGCAGCTCCAGAGTTAGCTCATACTATGCAAGTGAATGAGAAATGTGATGTTTACAGCTTTGGAGTACTTGCTTTGGAAATCATTATGGGAAAACATCCTGGGGATCTCATTTCTTTATTCATGTCACCATCTACAGTGCTAGTGGCTGATGATTTGCTATTGAGTGATGTTTTGGATCAAAGACTTCCTCAACCAATAAAACCAATTGATGAGAATGTGATCTTGATTACATGGTTGGCACTTGCTTGTTTGAGTAAAAATCCACGTTCTCGCCCACCCATGGATCAAGTATCTAAGGCACTTGTAACAGGAAAATCACCTGTGAGAGACCAAATTCCCATGATCAAACTAGGCCAACTCCATTGA 2928 0.3805 MEHMFMVILAYWRILFIFLCVILTPQAAAEDSEANALLKWKNSFENQSQAVLSTWKGTNPCKWKGIQCDKSNSVSTINLANYGLKGTLHTLSFSSFPNLLILNILNNFFHGTIPPQIGNLSKVNVLNFSSNPLDGSIPQEMWTLRTLHSLDLSLCKLSGEIPNSIANLSNLSFLDLGTNKFSGYIPPGIGKLNKLEYLAIAENNFFGTIPQEIGMLTKLRLMDLSLNSLSGTIPRTIGNMSNLNRLVISNNTLLSGPIPSSLWNMSNLSWLQLYGNSLSGSIPSSIGNLVNLNILILESNHFSGPIPSTIGNLTKLTELYLGFNNFSGSIPASIGNLINLDVLSLQGNNLSGSIPTTIGNLKRLTVLELSTNKLSGSIPKVLNNITNWLSLLLSKNDFIGHLPSQICSGGSLVYFNAYENHLTGPIPTSLKNCSSIVRLRLEGNQLEGDIAQDFGVYPNLEYIDLSDNKFHGHISPNWGKCPKLNSLMISNNNISGGIPVELVEATKLGRLHLSSNHLTGKVPKQLGNLKSLVELKTNNNKFSGYIPTEIGLLQKLEILDLGGNELSGTIPKEVMMLPKLRNLNLSINKLEGSIPSQFGLSLESLDLSGNFLNGKIPTSLGSLKHLSMFNLSHNGLSGTIPPTFSGTLDFVNISDNRLEGPLPNSPAFLHAPFESLKNNKGLCGNVTGLTPCPTNNSKKKQQSHLVATENFDDKYLIGVGSQGNVYKAELAAGLVVAVKKLHSVTDEEMSNFSSRFSFLVYKFLEGGSLDQILNNDTQAFAFDWEKRVNVVKGVANALSYLHHDCSPPIVHRDISSKNVLLDLEYEAHVSDFGTAKFLKPGSHSWTPFAGTFGYAAPELAHTMQVNEKCDVYSFGVLALEIIMGKHPGDLISLFMSPSTVLVADDLLLSDVLDQRLPQPIKPIDENVILITWLALACLSKNPRSRPPMDQVSKALVTGKSPVRDQIPMIKLGQLH 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00134 975 ProSitePatterns Tyrosine protein kinases specific active-site signature. 809 821 IPR008266 GO:0004672|GO:0006468
Sebi2g00134 975 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 256 355 - -
Sebi2g00134 975 FunFam MDIS1-interacting receptor like kinase 2 764 961 - -
Sebi2g00134 975 SUPERFAMILY Protein kinase-like (PK-like) 695 955 IPR011009 -
Sebi2g00134 975 Pfam Protein kinase domain 758 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi2g00134 975 Gene3D Transferase(Phosphotransferase) domain 1 764 965 - -
Sebi2g00134 975 FunFam MDIS1-interacting receptor like kinase 2 isoform A 30 185 - -
Sebi2g00134 975 Gene3D Ribonuclease Inhibitor 574 691 IPR032675 -
Sebi2g00134 975 Gene3D Ribonuclease Inhibitor 280 383 IPR032675 -
Sebi2g00134 975 Gene3D Ribonuclease Inhibitor 384 473 IPR032675 -
Sebi2g00134 975 SUPERFAMILY RNI-like 343 661 - -
Sebi2g00134 975 SMART LRR_sd22_2 553 585 - -
Sebi2g00134 975 SMART LRR_sd22_2 313 339 - -
Sebi2g00134 975 SMART LRR_sd22_2 361 387 - -
Sebi2g00134 975 SMART LRR_typ_2 216 240 IPR003591 -
Sebi2g00134 975 SMART LRR_typ_2 553 576 IPR003591 -
Sebi2g00134 975 SMART LRR_typ_2 168 192 IPR003591 -
Sebi2g00134 975 SMART LRR_typ_2 265 289 IPR003591 -
Sebi2g00134 975 SMART LRR_typ_2 361 384 IPR003591 -
Sebi2g00134 975 SMART LRR_typ_2 577 600 IPR003591 -
Sebi2g00134 975 SMART LRR_typ_2 313 337 IPR003591 -
Sebi2g00134 975 SMART LRR_typ_2 623 646 IPR003591 -
Sebi2g00134 975 SMART LRR_typ_2 120 144 IPR003591 -
Sebi2g00134 975 Pfam Leucine Rich Repeat 601 623 IPR001611 GO:0005515
Sebi2g00134 975 SUPERFAMILY RNI-like 77 384 - -
Sebi2g00134 975 Pfam Leucine rich repeat 458 518 IPR001611 GO:0005515
Sebi2g00134 975 Pfam Leucine rich repeat 315 374 IPR001611 GO:0005515
Sebi2g00134 975 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 436 956 - -
Sebi2g00134 975 Gene3D Phosphorylase Kinase; domain 1 692 761 - -
Sebi2g00134 975 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 385 696 - -
Sebi2g00134 975 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Sebi2g00134 975 Gene3D Ribonuclease Inhibitor 474 573 IPR032675 -
Sebi2g00134 975 ProSiteProfiles Protein kinase domain profile. 711 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi2g00134 975 Gene3D Ribonuclease Inhibitor 185 279 IPR032675 -
Sebi2g00134 975 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00134 Sebi-Chr2 2923890 2927722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi2g00134 14 857 Receptor kinase-like Gene Family AT4G08850 39.895 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi2g00134 Pkinase 1.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00134 - - gmx:100814634 954.125