Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00129 ATGGAAGGAGAGAGAGGTGTTCCCAATTATGAGCTTCAAGTTTCATTCTCCTCACAACCCATAATCCACCAAATGGGTTTTGCTCAATTTGAAGAAAATAATCAAGTCCTTGGCCTCTTGTCACCTTCTTCACAATCTCAATCTTCTCAGCTCTCTCAATCCTTAAACAGTGGCGCCGCCGCCAGCACCACCGCCGCCACAACCATCGGATTCAGTCATAACGAACTGGTCCCCAGAACATGGAATAACGACCAGGTGGGAACTCTGGATCCTAAGGCTGTTAATGATGAAAATTGCACTGGAAACGCTAGTGATGGCAATAACAATTCATGGTGGAGGAGTGCAGCTGCAGATAAGAGCAAGGTGAAAATAAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTCGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGGTAA 498 0.4458 MEGERGVPNYELQVSFSSQPIIHQMGFAQFEENNQVLGLLSPSSQSQSSQLSQSLNSGAAASTTAATTIGFSHNELVPRTWNNDQVGTLDPKAVNDENCTGNASDGNNNSWWRSAAADKSKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00129 165 Gene3D WRKY domain 131 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi2g00129 165 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 165 IPR044810 GO:0003700
Sebi2g00129 165 Pfam WRKY DNA -binding domain 145 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi2g00129 165 ProSiteProfiles WRKY domain profile. 139 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi2g00129 165 MobiDBLite consensus disorder prediction 81 106 - -
Sebi2g00129 165 SUPERFAMILY WRKY DNA-binding domain 136 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00129 Sebi-Chr2 2830574 2831901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi2g00129 3 165 WRKY Transcription Factor Family AT2G44745 53.801 1.29e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi2g00129 WRKY 1.6e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00129 - - cave:132166977 226.868