Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00071 ATGGATACATTGAGTGAAGATTTATTTGATAGTTTTATGAGGACAGAATCTAATAGGAAGAGTGATGGTTACGAACCCGAAAAATCTAATTCACCTCCTAAACATAATGTTGATTCTGATGAGATTGGTGATGGTTATAAAAAGATATTTGAACTCACAGATGAGGATATCAGAGCTCTTGAGTTTGATTCTAAAGAAGATGGATTTGTTTTCTACCGTGAGTATGCAAAATTCATAGGGTTTGCTGTTAGGAAACATGATGTGTATAGAGATCGTAATGATGTAATCACAATGAGACAATTTGTATGTAACAAGGAGGGAGAAAGAAGTGTGAAGCACCTTAATAGGACTGATAGAAAGAGGGAGGCAAAGGCCATTACACGAACAAAATGTAATGCAAGGCTCCGAATTCATTTAGATTATAAGAGTAGAAAGTGGATTGTTGGTTGTTTTGAGCCAGCCCACAACCATGAATTGACTCCTGCTAGAATAAACTCTTTCATTAAGAGGTATGTTCAGAGCAAAAATAGCCTTGTGGATTTTCTTCACAATTTTGACAGAGTTGTTAATGAATACAGACACAACGAGTTAACCTCAGATTTCAAGTCTACATACACTCAACCTGTGATGACAACTGCATTGGAAAAGTATGAAGTTGAAGCTTCTAATTTGTACACGAGGAATAAGTTCTTTGATGTTCGTAAGGAAATCGAGAAAGTTGTTGCCATAAATGTCATTGATAGGTCAGATGTTGATAATGTAGTTAGAATGAAGATGAATAAATTTGGAAATCCTGATGTTGAAAATGTTGTTCAGTTAGATAAGTCCAATGGTAATTTGATTTGTGACTGTCGCTTATTTGAATCATGTGGCATCCCATGTTCACATATACTTTGTGCTATGAAGCATGAGCAAATGGAATCCATTCTTGCATCTTTGATTTGCAAAAGATGGACAAGGTTAGCTAAAGTTGACCACATTTCTGCTGTTTATGTTGAAGAAGGTGACACATCAAAGAAGGAGTTATTGAGGTCTGGTGCTGTTGGTGCTGCATGTAACAGGCTTAACAAGGCTGCTCGTAAAAATCCTCACAACTTTGTCAAAAACATTGAATCTATTCATAAGTTAGCTGAACAGATGGAAAGGGAAGAAGGGCACACAGTTAGGACATGCAAAAAATATGCCACTCGTGATCAGTTGGATACAGTTCTTGAAGAGCAATCATCTATTGAGACTGATGAAGAGTCGAGAGACCAAAGTTTGTCTGTGAATCCTCGATATTCCCAGGATTTGAATGATGTATCTGTTTCTGCTGATCATAATTTTGCTTCAGACAAGGGTCAATCTAAGAAGAAAAGGAAACGTAATGAAGGAGTGAAACATAATGAAGCAGTGAAACTGACACAAGAATCAGTTAATGAAGTGAGGTCCAGTGATGTAAATACGACTCATGAGGCTGGTATGAGATCCAAAATCAGTACTAAATCTGATTTCAATGTCAATCAGATGAGGACCCCATCATTATTTGATAATCATGTTTATGTATCAAACATGAATGCTCCAAGTATGTCAGGATCTGTACATTTTAGACCATCAATGATTCATGGATTTGGGGAAGGTTTAAATGCTAATAGGTTTCAGTATATGTCTCAATATCCTCAAATGTATATGTGA 1674 0.3638 MDTLSEDLFDSFMRTESNRKSDGYEPEKSNSPPKHNVDSDEIGDGYKKIFELTDEDIRALEFDSKEDGFVFYREYAKFIGFAVRKHDVYRDRNDVITMRQFVCNKEGERSVKHLNRTDRKREAKAITRTKCNARLRIHLDYKSRKWIVGCFEPAHNHELTPARINSFIKRYVQSKNSLVDFLHNFDRVVNEYRHNELTSDFKSTYTQPVMTTALEKYEVEASNLYTRNKFFDVRKEIEKVVAINVIDRSDVDNVVRMKMNKFGNPDVENVVQLDKSNGNLICDCRLFESCGIPCSHILCAMKHEQMESILASLICKRWTRLAKVDHISAVYVEEGDTSKKELLRSGAVGAACNRLNKAARKNPHNFVKNIESIHKLAEQMEREEGHTVRTCKKYATRDQLDTVLEEQSSIETDEESRDQSLSVNPRYSQDLNDVSVSADHNFASDKGQSKKKRKRNEGVKHNEAVKLTQESVNEVRSSDVNTTHEAGMRSKISTKSDFNVNQMRTPSLFDNHVYVSNMNAPSMSGSVHFRPSMIHGFGEGLNANRFQYMSQYPQMYM 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00071 557 MobiDBLite consensus disorder prediction 1 42 - -
Sebi2g00071 557 Pfam FAR1 DNA-binding domain 71 160 IPR004330 -
Sebi2g00071 557 ProSiteProfiles Zinc finger SWIM-type profile. 267 305 IPR007527 GO:0008270
Sebi2g00071 557 SMART 26again6 280 307 IPR006564 GO:0008270
Sebi2g00071 557 MobiDBLite consensus disorder prediction 7 42 - -
Sebi2g00071 557 MobiDBLite consensus disorder prediction 444 461 - -
Sebi2g00071 557 PANTHER OS01G0519700 PROTEIN 175 384 - -
Sebi2g00071 557 MobiDBLite consensus disorder prediction 405 461 - -
Sebi2g00071 557 MobiDBLite consensus disorder prediction 421 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00071 Sebi-Chr2 1943587 1946513 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi2g00071 FAR1 1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00071 - - vvo:131629359 236.498