Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00052 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCATCCCAATTCACCATCCTCTCCTTTCAGGAAACAAAAGAACAGCAACAAAAGGAGGCTTGGATCAAGAGCCTCTTCCTTTGAGTATTGGAGGAATGAGCCACTTCATAGGATCCCTGGCAGGATCTTCCTCAATGGCTCCAGCCAAGTTGCCTCCTTGTTCACCCAACAAGGAAAGAAGGGCACCAACCAAGATGCCATGATTGTTTGGGAGAACTTTTGTTCTAGACATGATACAATTTTCTGTGGAGTTTTTGATGGCCACGGTCCATTTGGTCACATGGTTGCAAAAAGAGTGAGGGATTCTCTCCCTCTAAAACTGAATGCCCATTGGGAACCTAATGTATCTGGTGAGGAAGTCCTCAAGGAGATTAGCGTTAACACCGCAGGAAGCATGAACTCAGAAGATGCTGCCTTTGTATCTGCTGATGAGGAATCCAGGGTTTCCGTTGATGCTGAGGAAACGGAGAAATCTGAAAAACACCCTGAAATCTTTCAGACACTTAAAGAGTCCTTTTTGAAGGCATTCAAAGTTATGGATAGAGAACTGAAGATGCACCAAACTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTCTGATTAAGCAGGGTCGTGATCTTGTGATTGGAAATGTTGGTGACTCTAGAGCTGTGCTGGGTACCAGAGACAAAGATAATTCCCTTGTTGCAGTCCAGTTAACTGTGGATCTAAAACCCAATCTTCCTGCTGAAGAAGAAAGAATCCGCAAATGTAAAGGACGAGTCTTTGCTCTGCAGGATGAACCTGAAGTTGCTCGAGTCTGGTTACCAAATAATGACTCCCCTGGCCTTGCCATGGCAAGGGCATTTGGAGATTTTTGTCTGAAAGATTTTGGTCTGATATCTGTTCCAGAGGTAACATACAGACGTCTCACTGAGAAGGATGAATTCGTTGTCTTGGCAACAGATGGGATTTGGGATGTGCTTTCAAACAAAGAAGTAGTAGACATTGTAGCAGCATCACCAAGGCGATCCTCAGCAGCTAGAGCATTAGTTGAGTCAGCAGTTAGAGCATGGAGATACAAATATCCAACTTCCAAAGTGGATGATTGTGCTGTGGTGTGCCTCTTTTTGGACTCAGACTTGAACAAAATATCTACTGCTTCTTCCCATGGAACCAAGTCCAAAGAGCAGCCTAGTTCAATGATCCAAGTAAGCAATGGTGATGGAGTGGAAGAAGATGTCTCTGGACCAACTGTTCTAGAAAGGTCAGGAACATGCAGGGAAGGAAATGGTGAAGGTAACACTTCACATGAAGAGGAAGAATTGAAGGAAGAAGAGGCAGAGATAGATGCTGATGAGTCAGAAAAAGAGTGGTCTGCACTTGAAGGGGTGTCTCGTGTGAACACATTGTTAAATCTTCCAAGATTTGTCCCTGACAAAGAAGACAAAGAAGCAGTAGCACAAGGGATGAGAAAACGCAAATGA 1506 0.4456 MGSCFSAESRSPHPNSPSSPFRKQKNSNKRRLGSRASSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMIVWENFCSRHDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLNAHWEPNVSGEEVLKEISVNTAGSMNSEDAAFVSADEESRVSVDAEETEKSEKHPEIFQTLKESFLKAFKVMDRELKMHQTIDCFCSGTTAVTLIKQGRDLVIGNVGDSRAVLGTRDKDNSLVAVQLTVDLKPNLPAEEERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVTYRRLTEKDEFVVLATDGIWDVLSNKEVVDIVAASPRRSSAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDSDLNKISTASSHGTKSKEQPSSMIQVSNGDGVEEDVSGPTVLERSGTCREGNGEGNTSHEEEELKEEEAEIDADESEKEWSALEGVSRVNTLLNLPRFVPDKEDKEAVAQGMRKRK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00052 501 MobiDBLite consensus disorder prediction 394 464 - -
Sebi2g00052 501 Coils Coil 442 464 - -
Sebi2g00052 501 PANTHER PROTEIN PHOSPHATASE 31 382 IPR015655 GO:0004722|GO:0006470
Sebi2g00052 501 Pfam Protein phosphatase 2C 159 362 IPR001932 -
Sebi2g00052 501 SUPERFAMILY PP2C-like 55 385 IPR036457 -
Sebi2g00052 501 MobiDBLite consensus disorder prediction 1 34 - -
Sebi2g00052 501 ProSiteProfiles PPM-type phosphatase domain profile. 62 384 IPR001932 -
Sebi2g00052 501 CDD PP2Cc 61 384 IPR001932 -
Sebi2g00052 501 FunFam probable protein phosphatase 2C 33 57 387 - -
Sebi2g00052 501 SMART PP2C_4 53 382 IPR001932 -
Sebi2g00052 501 MobiDBLite consensus disorder prediction 1 23 - -
Sebi2g00052 501 Gene3D - 57 386 IPR036457 -
Sebi2g00052 501 MobiDBLite consensus disorder prediction 394 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00052 Sebi-Chr2 1316621 1320226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi2g00052 1 487 PP2C-type Phosphatase Gene Family AT3G02750 64.794 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00052 - - gmx:100790373 812.757