Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00029 ATGGTTTCGCTCTCCCCCAACCCCTTCTTTCCCCTCACTGCAAAAAACGCTTCTTCTTCTCTTTCTCCTTCTACTAGATTCCCACCTCCAAACAAGGCAAATCCACTCTATAAAAACAATAAGCACACTAAGGATCACAGAAAGGTTGTCTGTGCTTGCATCGCTCCTCCGCGCAACTTCAACACCCATGACTCCTCCGCTATTAAATTCAATGGTTCATCCAAATCAGAGCAATTAAACACCGTGCAGGATCATGAGGATGATTCTGGTGTTCTTATTGAATGTAGAGATGTCTACAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGATCAGGCATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACTGGCAAATCTACAGTTTTGAAGATTATAGCAGGACTTCTTGCTCCAGACAAGGGGGAAGTTTACATTCGAGGTAAAAGGAGAGTTGGTTTGGTAAGTGATGATGAGATAGCTGGTCTTCGGATTGGATTGGTGTTCCAAAGTGCTGCACTTTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTATATGAAAACTCAGGCATGTCTGAGGACCAGATATCAGAGCTTGTCAAGGAAAGCTTAGCAGCCGTTGGATTGAAGGGAGTTGAGGATCGGCTGCCTTCTGAGTTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATTTATGACACGACAAAGGATTCAATCGAGCCAGAGGTGCTATTGTATGATGAACCAACTGCTGGACTTGATCCCATTGCATCTACTGTTGTTGAGGATCTGATTCGCTCTGTGCACATAAAAGGGCGAGATGCAGTTGGAAAACCTGGAAAGATTGCATCTTATGTGGTTGTTACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGATTGTTGTTTCTACACAAGGGAAAGATTGTTTGGGAAGGAATGACTCATGAATTTACAACTTCAACGAATCCAATTGTTCAGCAGTTTGCTTCCGGGAGCTTGGATGGTCCTATCAAATATTAG 1062 0.4256 MVSLSPNPFFPLTAKNASSSLSPSTRFPPPNKANPLYKNNKHTKDHRKVVCACIAPPRNFNTHDSSAIKFNGSSKSEQLNTVQDHEDDSGVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGKRRVGLVSDDEIAGLRIGLVFQSAALFDSLTVRENVGFLLYENSGMSEDQISELVKESLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDAVGKPGKIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIKY 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00029 353 CDD ABC_Org_Solvent_Resistant 93 342 - -
Sebi2g00029 353 Gene3D - 79 345 IPR027417 -
Sebi2g00029 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 334 IPR027417 -
Sebi2g00029 353 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 93 344 IPR003439 GO:0005524
Sebi2g00029 353 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 21 353 - -
Sebi2g00029 353 ProSitePatterns ABC transporters family signature. 228 242 IPR017871 GO:0005524|GO:0016887
Sebi2g00029 353 SMART AAA_5 117 321 IPR003593 GO:0016887
Sebi2g00029 353 MobiDBLite consensus disorder prediction 15 39 - -
Sebi2g00029 353 Pfam ABC transporter 108 263 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00029 Sebi-Chr2 742990 748357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi2g00029 99 337 Calmodulin-binding Proteins AT2G36910 27.490 6.38e-14 71.2