Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00025 ATGAATATGAATTCTGAAAATAATGAAGATGGTTTTCGTTTCTTGGTGGAGGATGAAGTTGGAGGTGTATTTGTAGTAGATGAAACTTGGCTTGACAAATGTGTAGTTGAAGATGAAGGGGAAAATGATAATGATGAAGATGGGGATGTTGTCTTTGTTGATCATGATTGGGAAGATAGCAATGAGGGAGAAGGAAATGAAGATGAGTTACAGGGGGAAACAAAATTAATGAACAATGAAGATGATATTCTGAATATGGGGGAGCTCAATTTGTTTAGTCCCCATGAAATTAAGAATTGGGAATTTGGTAATTTGGATGTGGCTTGCAAGTTCTATTGTGAATATGCAAAAGCCAATGGATTTAGTATACGCAAGGGCAAAACATTGAGGAATAGGAAGACCTTGGAGGTGTATCAGAAAGAATTTTTATGCTCCAGAGCCGGTACCCGTGAAGATAGGGGTCTTAGAATGGAAGATAGGGTTCGTGAGCCTAGAGTTGTAACTAGATGTAATTGTTCAGCTAAATTTGTAGTCCATGTGAACAAGTTATCTGGTCGATGGTTTTGTGTTTGCTTTGTTGATGAGCATAACCATGACCGATTAGGGGCAGTTCATTGCAGTATGCTTCCTGCCTATAGAAAAATGGGTGACAGTGATGTGGTACAAATGAACAACATGATTAAGGTTGGTATCAGGCCACCTAATATATTCAGTTCATTTGCTAGTCAGTCAGGAGGGTATGAGAAGATTGGGTTTAGTAAGAAAGACATGTATAACAAGATAAATGAGCAGCGGCGGAAGGTTTGTTCTGATGCTAAAGGCGCTGTCCAATTCCTTGGTGAGCTTCGACTGATTGATACTATGATGTATTTTGAACACACCGTTGATGCAGAAGGTAGGCTTCAACATCTATTTTGGAGTGATGGCATGAGTCAAGTGGATTACAAGATGTATGGGGAAGTGTTGGCATTTGATGCAACCTATGGTAAAAATAAGTACTTTATGCCACTAGTTGTTTTTTGTGGAGTTAATAACCACAATCGGAGCATAATATTTGCTGCTGCCATAATTGCAAACGAGACTGAGGAGACATACGTGTGGATTTTGGAGCAGTTTTCAAAAGCAATGAAAGAGTTCACAAAAGCGTTTGAGGATTGTATGCTTCGTTACTATGATATTGCGACATTTCGGAGAAAATGGAATGAAATTATAACAAAATTTGGTCTTGAAGAGAATCCTTGGGTTGTTGGTTTGTTTGAAAAGAGGACTATGTGGGCTACAGCTCATCTTAGGGGGAAATTCTTTGGTGGATTCAGAACAACTTCTAGGTGTGAGGGCTTGCATTCAGAGTTATCAAAGTTTGTGAGCTCTAGATACAATTTGAGTGATTTCCTACAGCATTTTCATCGTTGCTTAGGTCATATGCGTTTCAAAGAGAAAGAAGATGATTTCACATCAATACATGGGGACCCTGTAATGCAAAGTCAGCTCCAATCACTTGAAAGTTATGTTGCCAGAGTGTACACAAGGAGAGTATTTTTCTTGTTTCGGCGGGTGTTGCATAGGGCGTCACAGTTGGTAGTCACTGGATATACCCAAGCTGTTCGATGCACTATATTCAAAGTGAGAGGCCAATCTGTTCAGTCATATGAATGTCGTGTATCAGTGTATCCGTCCACAAAAGAATTTAAATGTGGTTGTTTAAAAATGGAGTCAAGAGGCTTACCGTGTGAGCATATTATTGCTGTCTTGGATCACTTGGGAATTGATGAAATACCAGATACATTGGTTCTAAAACGGTGGACGAAGGGTGCTAAAGACGGTATATGTGGAGAAGATGGGGAGAGATATGAAACATGGGATGCTGCTAGGAGTGCTCGGAGGGCAGCACTAAATGGTTGGTACGATCAAGTTAGTTGTTTTAAGGTTGAAACTATAGAAAAATATAATATAGAGCGAGACAGGATACTCACTGACCTCAAAGAATGCAGGGCGGAAAAATCGGCCGAACAAGAAAGATGTGGGTTTTCTAGTAATGTTGCTAATGACACATTGAGGAACCCCGTGCGTGCAGCAACCAAGGGCAGCGGGGTTGCAACATCTTCTTCTGGTATAAGAGTTAGAAGAAAACAAAATTGTTCTATTTGTAAGCTTCCGGGACACAACAAATTGACATGCCCAAGGGTTGCTCAACAATATGAACCAACACAGCAAGGTGGAGCAGCTAGAACCTCTCAGACTGTTGAACATGATGATGTTTTTCATGATTATGAAGAATTTGATCTTGATAATTGGACTTTTGAGTAA 2307 0.3997 MNMNSENNEDGFRFLVEDEVGGVFVVDETWLDKCVVEDEGENDNDEDGDVVFVDHDWEDSNEGEGNEDELQGETKLMNNEDDILNMGELNLFSPHEIKNWEFGNLDVACKFYCEYAKANGFSIRKGKTLRNRKTLEVYQKEFLCSRAGTREDRGLRMEDRVREPRVVTRCNCSAKFVVHVNKLSGRWFCVCFVDEHNHDRLGAVHCSMLPAYRKMGDSDVVQMNNMIKVGIRPPNIFSSFASQSGGYEKIGFSKKDMYNKINEQRRKVCSDAKGAVQFLGELRLIDTMMYFEHTVDAEGRLQHLFWSDGMSQVDYKMYGEVLAFDATYGKNKYFMPLVVFCGVNNHNRSIIFAAAIIANETEETYVWILEQFSKAMKEFTKAFEDCMLRYYDIATFRRKWNEIITKFGLEENPWVVGLFEKRTMWATAHLRGKFFGGFRTTSRCEGLHSELSKFVSSRYNLSDFLQHFHRCLGHMRFKEKEDDFTSIHGDPVMQSQLQSLESYVARVYTRRVFFLFRRVLHRASQLVVTGYTQAVRCTIFKVRGQSVQSYECRVSVYPSTKEFKCGCLKMESRGLPCEHIIAVLDHLGIDEIPDTLVLKRWTKGAKDGICGEDGERYETWDAARSARRAALNGWYDQVSCFKVETIEKYNIERDRILTDLKECRAEKSAEQERCGFSSNVANDTLRNPVRAATKGSGVATSSSGIRVRRKQNCSICKLPGHNKLTCPRVAQQYEPTQQGGAARTSQTVEHDDVFHDYEEFDLDNWTFE 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00025 768 Coils Coil 646 666 - -
Sebi2g00025 768 PANTHER OS01G0519700 PROTEIN 99 377 - -
Sebi2g00025 768 Pfam MULE transposase domain 321 380 IPR018289 -
Sebi2g00025 768 Pfam FAR1 DNA-binding domain 110 199 IPR004330 -
Sebi2g00025 768 Pfam SWIM zinc finger 564 587 IPR007527 GO:0008270
Sebi2g00025 768 ProSiteProfiles Zinc finger SWIM-type profile. 550 588 IPR007527 GO:0008270
Sebi2g00025 768 SMART 26again6 563 590 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00025 Sebi-Chr2 666618 669221 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi2g00025 FAR1 7.9e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00025 - - tpra:123913749 640.573