Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00019 ATGGCAACCGCGGCGGCGCTCTTTCCTATCTCCGCCGTTCGCGTCATTCCTCCCTCCTCTATCTGCCACGTGTCCTTACTCTCACCGCCCTCCTCCTCTCCTCCCGCTTTCGCCACTCCTCACTCTCCTCCCCTCGCCCTTCTCGGCGCGTTCCGCACGCGCGCTTTCTCGACTCGCTCTTCCAACGACCGCGAATCGGAGACCGACTCGTTCCATGTCGACTCGCCCATTCGCGAATCGGAGACGGACTCGTTCGGTATCGACTCGCTGGTGGTTAACTATAGTTTCGTCTACTTTGGCTCTCAGAATTGCTCTTCTTTTTCCTCTGGTTTTAACACTTCACAAGACGAAGCATCCATGAGCTGGTTGGAAGCTGAAATCTCTGCAAAGGTAGAGGGGAAATTGCTCCATTCCAAGGTTCCTTGCTTCTTCCTGTGGATGGTTAGCATCAGGAAGATGTCTTTGAATGGTCACCCTGGTTTCGATTGCAGAAGCTATATCATAGTGTTGAGTGGTGACATATACATGCACTATATGCACAAAGACACTAATTGTTGGTTCATCTTTCCTTTTCTCATTGCTGGTTTGCACTACATTATTGTTCAGATATCCTTTCGGAAACCTTTGGTTGAAGAATCTACGAGGGGCATTTTTGACATATTAGCCAAATACTACAAGCGATACTTGGACTTTCTAACGTTGCCTATAGCTTTTATTGGCTTTTGTATTCCTCAGGGGAGCCAACTCTATTGGATTACCAATAGTTCATTAACCCTCATTCAGCACGTCACTCTTAGACATCCTGCTGTCCTTGCAAAGTTGGGGTTACTAGACAAGAATAGTCAAGAAGCAGCTTCTGAGGAAATTGGTAGATCTAAAACAACCCCATCACTGAGCCCTCTGGATTCACCCGAAAAGTGGCAGAAAATACCTATAGAGGACATGTCCCCTAAAGAACTGACTGCTCTTTCAATCCCATTTCTATCCAGTGAGGATAAAGAAAGTGCGATTCCTTTACTAAAACTAGCACTTGATAAGGACCCTGAATATGTAAGAGCTTTGGTTTTGATGGGACGGGTTCTATTCCTGAAGCATGTAGATGATGAAGCTAAAGAGTACTTTGAGCGTGCAATATCAAAGCTTTCTCTTGCTGGCCAACCAACTGATGCAGAAGATGTTGATCTTTTGATTCTTTCATCCCAATGGGCTGGAGTTGCCTGTGAACGACAGGGAAAGAAGGCCGAAGGACGTGCACACTTTGAAAGAGTTGCAAATATGGAGGAGCCTGAAGATCCTACTAGCAAAGGCTATTATTTTGATGGGTTGCTGTTGCTGGCCAGTACTCTATTTGATGCGGGTCAAAAGGCTGAAGCTGCAAAATATCTGCGTCGTGTTGTTGCTTATAAGCCTGCTTATAAAAAATTTTTGGAACAGTGTGAGCAAGATGAAGATTTTGCGAGTGATCTTGCCCGTAGTAGGAGAGAACTCTGA 1491 0.4594 MATAAALFPISAVRVIPPSSICHVSLLSPPSSSPPAFATPHSPPLALLGAFRTRAFSTRSSNDRESETDSFHVDSPIRESETDSFGIDSLVVNYSFVYFGSQNCSSFSSGFNTSQDEASMSWLEAEISAKVEGKLLHSKVPCFFLWMVSIRKMSLNGHPGFDCRSYIIVLSGDIYMHYMHKDTNCWFIFPFLIAGLHYIIVQISFRKPLVEESTRGIFDILAKYYKRYLDFLTLPIAFIGFCIPQGSQLYWITNSSLTLIQHVTLRHPAVLAKLGLLDKNSQEAASEEIGRSKTTPSLSPLDSPEKWQKIPIEDMSPKELTALSIPFLSSEDKESAIPLLKLALDKDPEYVRALVLMGRVLFLKHVDDEAKEYFERAISKLSLAGQPTDAEDVDLLILSSQWAGVACERQGKKAEGRAHFERVANMEEPEDPTSKGYYFDGLLLLASTLFDAGQKAEAAKYLRRVVAYKPAYKKFLEQCEQDEDFASDLARSRREL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00019 496 SUPERFAMILY TPR-like 321 473 IPR011990 GO:0005515
Sebi2g00019 496 Gene3D Tetratricopeptide repeat domain 310 496 IPR011990 GO:0005515
Sebi2g00019 496 SMART tpr_5 351 384 IPR019734 GO:0005515
Sebi2g00019 496 SMART tpr_5 439 472 IPR019734 GO:0005515
Sebi2g00019 496 SMART tpr_5 317 350 IPR019734 GO:0005515
Sebi2g00019 496 MobiDBLite consensus disorder prediction 287 302 - -
Sebi2g00019 496 Pfam Tetratricopeptide repeat 442 471 IPR019734 GO:0005515
Sebi2g00019 496 PANTHER OXA1 139 288 IPR001708 GO:0016020|GO:0032977
Sebi2g00019 496 MobiDBLite consensus disorder prediction 285 304 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi2g00019 182 324 Chloroplast and Mitochondria Gene Families AT2G28800 25.694 3.48e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00019 - - gmx:100797573 555.829