Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi2g00004 ATGGAGGAAGATTGGGATCTACATGCGGTGGTTAGAGGCTGCAACTCTTCCACCGTTACCTCCACCACCACCACAGCATCCTCTGTGTCTTCTTCTTCCTCTTCCTCTGGTTTTGGCTCTTGTTACTTGCAGCAACCTGAAGCTAATTCATGTGGGTTTTCTATCTTTGATGGTGCACAACAACAAGGTCAAGTTTTGTCACTTCCTGCATACCCCTTTGAAGCAAAAGGTTCCATTGAAGAGTTGCATGAGCTTTGCAAGCCTTTCTTTTCCAAATCACAGCCTCCTCTGATCTCATTGCAAGCCTCTCCCTTGTCACCATTCTCTTATTCTTCCTCTGCAACACCAAAATCAGCTCAGACACAAGAGAAACACCAGCAGCGGAGTAAACAGTCTCATTCTGTCACCACCCCACGATCTAAAAGAAGGAAGAACCAGCTTAAGAGAGTTTGTCAAGTACCAGTTGAGAATCTCTCATCAGACATATGGGCATGGAGGAAATATGGACAGAAACCCATAAAAGGGTCACCTTATCCAAGGGGATACTATAGATGTAGCAGCTCAAAAGGGTGTTTAGCAAGGAAACAAGTTGAGAGGAACAGATCAGACCCAACAATGTTCATAGTCACCTACACAGCTGAACACAACCACCCTGCTCCTACTCACCGAAATTCTCTTGCTGGTTCCACACGCCAGAAGCCCTTGACACCTCAAACTGGCACCACAAATGAAGATTCTGATAAGGCACTGACAAAACCCACTTCCCCTGCAACCTCAGGGGCAGAGGAAGAGGTTCCAATTCAGGGAGAAAAGTCAGAGAGCAGAGAAGAGAAGGAAGATGTGATGGATGACGAGGAAGAAGATGAATTTGGGTTATCTGATATGGTGTTAACAGATGATTTCTTTGAGAGTTTAGATGAACTGAGTCAACTCACTGGCTCTTCTGTAGTTACTGGAGATTGCTTCATTGATCCCTTTTCAGCTATTGCAATCCCTTCTTGGGTGGCCAATAGTGCTGCCACTGCTGCTGGTGGTAGCTGA 1041 0.4582 MEEDWDLHAVVRGCNSSTVTSTTTTASSVSSSSSSSGFGSCYLQQPEANSCGFSIFDGAQQQGQVLSLPAYPFEAKGSIEELHELCKPFFSKSQPPLISLQASPLSPFSYSSSATPKSAQTQEKHQQRSKQSHSVTTPRSKRRKNQLKRVCQVPVENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLTPQTGTTNEDSDKALTKPTSPATSGAEEEVPIQGEKSESREEKEDVMDDEEEDEFGLSDMVLTDDFFESLDELSQLTGSSVVTGDCFIDPFSAIAIPSWVANSAATAAGGS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi2g00004 346 SMART WRKY_cls 159 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi2g00004 346 Gene3D WRKY domain 143 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi2g00004 346 MobiDBLite consensus disorder prediction 109 151 - -
Sebi2g00004 346 MobiDBLite consensus disorder prediction 214 292 - -
Sebi2g00004 346 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 311 IPR044810 GO:0003700
Sebi2g00004 346 FunFam WRKY transcription factor 22 143 213 - -
Sebi2g00004 346 ProSiteProfiles WRKY domain profile. 154 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi2g00004 346 SUPERFAMILY WRKY DNA-binding domain 157 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi2g00004 346 Pfam WRKY DNA -binding domain 161 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi2g00004 346 MobiDBLite consensus disorder prediction 217 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi2g00004 Sebi-Chr2 231583 232886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi2g00004 1 345 WRKY Transcription Factor Family AT4G01250 46.240 1.44e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi2g00004 WRKY 3.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi2g00004 K13425 - gmx:100798084 509.605