Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00205 ATGGCAGAAGCAGCGTTGGCATCCAACGCAAACGCGGAAATGATGTATGTCAAGGTCATGACCGACGAACAAACTCGAGACTCTACGGAAACAATCGCGGTTTACGCAACCATCTGCGAACAACTCATCGAGATGCACAAATCACTCTCTGCTCACCAAGATCTAGCAGGGGTTAGGCTTGGTGGAATGTACTGTGACCCATTGATGGCATCTGGTGGCCACAAAATAAGTTCAAGGCAGAGGTGGACTCCAACACCTGTGCAGCTTCAGATTCTGGAGCGGATATTTGATGCTGGGACTGGGACTCCTAGCAAGGAAAAGATCAGGAGATAA 333 0.4925 MAEAALASNANAEMMYVKVMTDEQTRDSTETIAVYATICEQLIEMHKSLSAHQDLAGVRLGGMYCDPLMASGGHKISSRQRWTPTPVQLQILERIFDAGTGTPSKEKIRR 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00205 110 Pfam Homeodomain 79 109 IPR001356 GO:0003677
Sebi29g00205 110 PANTHER WUSCHEL-RELATED HOMEOBOX 13 8 109 IPR044559 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00205 Sebi-Chr29 2819708 2820389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00205 15 109 Wox Gene Family AT4G35550 71.579 9.85e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Sebi29g00205 Homeodomain 4.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00205 - - gmx:100784355 169.474