Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00198 ATGATATCACGGGAACAGAACAATCGAGCAGAGATCATCCACAATGAACAAGGAAACAGAACCACTCCTTCTTTTGTTGCTTTCATCAATGAACAAAGGTTGATTGGTGATGCTGCCAAAAATCAGGCTGCTGGCAATCCAGCAAACACTGTCTTTGATGCAAAGAGATTGATTGGAAGGAAATATAGTGACCCCATCATTCAGAATGATGTAAAGCTGTGGCCTTTTAAGGTCATTGCTGGTACTGATGATAAACCAAATTTTGTTGTCAAGTACAAGGGTGAGGAAAAGCACTTTGTTGCTGAGGAAATCTCATCTATGATCCTTACAAAGATGCGGGAGATTGCAGAGTCATTCCTGGAGTCAGATGATGATAGGTTCCAAGTAAAGGCCACTGCTGGAGATACTCACCTTGGAGGAGAGGACTTTGATAACAGGATGATGGAGAAGAGTGATGTAGATGATGTTGTCCTTGTTGGTGGCTCTTCTAGGATTCCAAAAGTGCAGCAGCTTTTGCAGGAATTTTTCAAGGGGAAGGATCTGTGTAAGAGTATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTCCAGGCTGCTTTGTTGAGTAAAGGCAATAAGCTTCTTTCAAGCCTTGTGTTGTTGGATATTACACCATTGTCACTTGTTCCTCCTGCTCCTAGAGGCCTTTCTATGAGTGTATGTTTTGCAATAGATGCTGATGGTATATTAAATGTCTCTGCTGAGGAAGAAACCACTGGGAATAAGAATGAGATTACCATAGGTATGAAGATGGAAGATTGTCATTGA 810 0.421 MISREQNNRAEIIHNEQGNRTTPSFVAFINEQRLIGDAAKNQAAGNPANTVFDAKRLIGRKYSDPIIQNDVKLWPFKVIAGTDDKPNFVVKYKGEEKHFVAEEISSMILTKMREIAESFLESDDDRFQVKATAGDTHLGGEDFDNRMMEKSDVDDVVLVGGSSRIPKVQQLLQEFFKGKDLCKSINPDEAVAYGAAVQAALLSKGNKLLSSLVLLDITPLSLVPPAPRGLSMSVCFAIDADGILNVSAEEETTGNKNEITIGMKMEDCH 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00198 269 SUPERFAMILY Actin-like ATPase domain 5 123 IPR043129 -
Sebi29g00198 269 Gene3D - 122 138 - -
Sebi29g00198 269 Gene3D - 150 185 - -
Sebi29g00198 269 PANTHER HEAT SHOCK PROTEIN 70KDA 223 261 IPR013126 GO:0005524|GO:0140662
Sebi29g00198 269 Gene3D - 6 121 - -
Sebi29g00198 269 FunFam Heat shock 70 kDa protein 52 107 - -
Sebi29g00198 269 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 200 268 IPR029047 -
Sebi29g00198 269 Gene3D - 186 199 - -
Sebi29g00198 269 Gene3D Actin; Chain A, domain 4 139 149 - -
Sebi29g00198 269 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 200 262 IPR029047 -
Sebi29g00198 269 Gene3D - 52 107 - -
Sebi29g00198 269 ProSitePatterns Heat shock hsp70 proteins family signature 3. 156 170 IPR018181 -
Sebi29g00198 269 SUPERFAMILY Actin-like ATPase domain 119 203 IPR043129 -
Sebi29g00198 269 Pfam Hsp70 protein 223 263 IPR013126 GO:0005524|GO:0140662
Sebi29g00198 269 Pfam Hsp70 protein 148 222 IPR013126 GO:0005524|GO:0140662
Sebi29g00198 269 Pfam Hsp70 protein 6 121 IPR013126 GO:0005524|GO:0140662
Sebi29g00198 269 PRINTS 70kDa heat shock protein signature 39 47 - -
Sebi29g00198 269 PRINTS 70kDa heat shock protein signature 17 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00198 Sebi-Chr29 2648561 2650853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00198 148 209 Calmodulin-binding Proteins AT5G02500 77.778 1.31e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00198 K03283 - oga:100956095 216.083