Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00197 ATGGGACACCATTCGGGATTTCACTCAGTCACAGGCCAAATTTCTGACCGTCTCTTTGGATCTGATCTTGTACGGCCTGTCAATTTGGTTGATAAGAACATGCCATCAATTGGTAGTGGAAATCTGAACATGGGAAGGAAGAATTTTGGGAATCAATATGGTAATGATCCATCTGTGGGGCTGTCAATATCTCATACCATAGCAGACCCTTCATCATCTCTGAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACAATTGCATGTCTGCTCCATCCATAGGGCACTCCTATAGTAGGGCTGATGATAGTACAATTTCAATAGGTGCTGGCTACAATAAGAATGATGGCAATATTTCATTGGGCCCAACTTATAACAATGAAAATGACAACACCGTTGCTATGGGGACTGGAATAAGTAAGACCGGTGACAACCTTGTTTCAGTGGGTCACACCTTTAATAAAGGGGATGGGAATTTATTTGTTGATGGGCCACAATTATGGGGAGATGGAAATTTCATATCAATGGGTCAATCATATGAAAAAGAAGATGGCAATTTGATATCTCTGGGTATCTCATATACCAAGGGGCAAGAGAACTTTATATCAATGGGTCCAACCTATGGTAAATCAGGAGAAAATTTCATAACTGTTGCTCCTTCTTATGACAAGGGCACCGATCATGTAACATCAATGGGTCCAACATATGACAAGGTGGATTCAAACATTGCATCAACAGTTCCATCATATGACAGGGGTGATTCTAGCCCTTTACCTATGGGTCAAAACCACAACAAGGGTCTGAGCAGTACCATATCTTTTGGAGGTTTTCATAATGATTCTGAACCAAATCCCTCTGGTGGAATCATTAGTGGCTATGATATGTTGATGGGCAACCAGAACTCAGCTCAAGGCTTGGATAGCCAGAAGGATTTGACTGAGTCAAACCCTGAACCACTTGTAAATAACATTACAAAACCTAATGCGAAAAATGATACTGTTAAGAACAAAGAGCCGAAGACAACCAAGAAGGCTCCTTCTAACAACTTCCCTTCAAATGTCAAAAGTTTGTTGTCAACTGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAGTCTTAAAGGAACCATAAAAGGAACTGGGTACTTGTGTTCGTGTGATGACTGCAAGCAGTCAAAGCCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCTAACAATCATATATACTTTGAGAATGGAAAAACCATCTATGCTGTTGTTCAAGAGCTGAAGAACACTCCTCAGGAGATGCTCTTTGATGCAATTCAAAATGTGACTGGCTCCAACATCAACCAAAAGAATTTTCGTATTTGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTGCAGCGTATTTATGGGAAGGATGAAGTGGTCATACCATCTTGA 1482 0.4076 MGHHSGFHSVTGQISDRLFGSDLVRPVNLVDKNMPSIGSGNLNMGRKNFGNQYGNDPSVGLSISHTIADPSSSLNFGGIRKVKVNQVRDSDNCMSAPSIGHSYSRADDSTISIGAGYNKNDGNISLGPTYNNENDNTVAMGTGISKTGDNLVSVGHTFNKGDGNLFVDGPQLWGDGNFISMGQSYEKEDGNLISLGISYTKGQENFISMGPTYGKSGENFITVAPSYDKGTDHVTSMGPTYDKVDSNIASTVPSYDRGDSSPLPMGQNHNKGLSSTISFGGFHNDSEPNPSGGIISGYDMLMGNQNSAQGLDSQKDLTESNPEPLVNNITKPNAKNDTVKNKEPKTTKKAPSNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGTIKGTGYLCSCDDCKQSKPLNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSNINQKNFRIWKASYQAATRELQRIYGKDEVVIPS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00197 493 PANTHER AUTOIMMUNE REGULATOR 6 434 - -
Sebi29g00197 493 MobiDBLite consensus disorder prediction 270 291 - -
Sebi29g00197 493 MobiDBLite consensus disorder prediction 300 335 - -
Sebi29g00197 493 Pfam Tify domain binding domain 386 441 IPR032308 -
Sebi29g00197 493 SUPERFAMILY Porins 65 249 - -
Sebi29g00197 493 MobiDBLite consensus disorder prediction 270 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00197 Sebi-Chr29 2640816 2642628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00197 345 474 PHD Transcription Factor Family AT3G53680 55.385 8.42e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00197 - - gmx:100787520 827.78