Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00191 ATGGCAATCTATAGAATTGCAATTGGGTCTCCTGGAGAGGCTGGCCAACCTGATGCAATTAGAGCAGCATTTGCAGAATTCTTCTCCATGTTGATTTTTGTTTTTGCTGGCCAAGGGTCTGGCATGGCTTACAGCAAAATTACCAACAATGGACCTGCAACACCTGCTGGTCTCATAGTTGCATCATTATCTCATGCATTTGGACTTTTTGTGGCTGTTTCTGTTGGGGCAAACGTTTCTGGTGGTCATGTGAACCCTGCAGTCACATTTGGTGCCTTCATAGGAGGAAACATAACCCTGTTGAGAAGCATTTTATATTGGATTGCCCAGTTGCTTGGTTCAGTTGTTGCTTGCATTCTTCTTAAGTCTGCTACTGGTGGAATGGAAACATCAGCTTTTGCTCTATCCTCTGGTGTCTCTGTCTGGAATGCACTAGTTTTTGAAATTGTGATGACTTTTGGCTTGGTATATACAGTTTATGCCACAGCAGTAGACCCAAAGAAAGGGAATGTGGGCATTGTTGCCCCAATTGCAATTGGTTTTATTGTGGGTGCTAATATCTTAGTTGGTGGTGCTTTTGATGGTGCATCCATGAACCCAGCTGTGTCCTTTGGCCCTGCTGTGGTTAGCTGGTCATGGACCCATCACGGGTCTATTGGGTTGGCCCATTCATTGGTGCAGCAATTGCTGCCATTATCTATGATAACATCTTCATTGGTGATGATGGTCATGAACCTCTCTCAAGCAGTGATTTCTAGATTTTTTTTTCAATTAATGAATGTTTGTCTTCACCATATTGAGGAGTGA 807 0.4337 MAIYRIAIGSPGEAGQPDAIRAAFAEFFSMLIFVFAGQGSGMAYSKITNNGPATPAGLIVASLSHAFGLFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRSILYWIAQLLGSVVACILLKSATGGMETSAFALSSGVSVWNALVFEIVMTFGLVYTVYATAVDPKKGNVGIVAPIAIGFIVGANILVGGAFDGASMNPAVSFGPAVVSWSWTHHGSIGLAHSLVQQLLPLSMITSSLVMMVMNLSQAVISRFFFQLMNVCLHHIEE 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00191 268 SUPERFAMILY Aquaporin-like 17 216 IPR023271 -
Sebi29g00191 268 PANTHER AQUAPORIN-8 6 216 IPR034294 -
Sebi29g00191 268 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Sebi29g00191 268 FunFam Probable aquaporin TIP1-1 4 250 - -
Sebi29g00191 268 Pfam Major intrinsic protein 16 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi29g00191 268 Gene3D Glycerol uptake facilitator protein. 4 260 IPR023271 -
Sebi29g00191 268 CDD MIP 21 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi29g00191 268 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi29g00191 268 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi29g00191 268 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi29g00191 268 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi29g00191 268 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00191 Sebi-Chr29 2570604 2572379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00191 1 216 Major Intrinsic Protein MIP AT4G01470 85.648 4.76e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00191 K09873 - gmx:100788583 407.912