Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00180 ATGGCTGCAATAATCCAGTGTGCTCTTGCTGCCATTGTGATCTCTGCTGTGATAGGTCTGGTGGATTATGAAGAGGCCATTTTTTTGTGGCGAGTAGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGCACTACAACATTGTTCCTTGGTATTGAGATTGGTGTACTTGTTGGGGTTGGGGTGTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACACGTTGCTGTTTTGGGTCGCTTGCCGGGGACAACTGTTTATAGAAATGTTAAACAATATCCTGAAGCATATACATACAATGGCATTGTAATTGTTCGTATTGATGCTCCTATTTATTTTGCAAACACAAGTTTCATAAAGGACAGGTTGCGGGAATATGAAGTAGATGTTGATAGTTCTACAAGGCGTGGGCCTGAGGTTGAGAGAATTCATTTTGTGATCCTAGAGATGGCCCCCGTGACCTACATAGACTCTAGTGCTGTTCAGGCTTTGAAGGATCTGTATCAGGAGTACAAATTACGGGACATTCAGATTGCAATATCCAATCCCAACCCAGAAGTTTTGCTTACCTTGTCTAGATCCGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCCTGCAGCATGTTCAAAGCTTGAAAGCAAAATCTTACAGTTCACAAACGCCACACTCTTTATCAGAAGACAAATCAAGGTTCTTTGCTCACTTATTTAAACAGAGAGGAGAGAACCTTTCAGTTACGGACGTGGAGTCTGGTAATGGCAGGCCTCCACCCTCCGAGGACAGAGATTCCCAATTGGAGCCATTGTTGTCAAAAGAACGTTGA 861 0.4262 MAAIIQCALAAIVISAVIGLVDYEEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLVGVGVSLAFVIHESANPHVAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRIDAPIYFANTSFIKDRLREYEVDVDSSTRRGPEVERIHFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPNPEVLLTLSRSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKAKSYSSQTPHSLSEDKSRFFAHLFKQRGENLSVTDVESGNGRPPPSEDRDSQLEPLLSKER 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00180 286 Pfam Sulfate permease family 3 43 IPR011547 GO:0016020
Sebi29g00180 286 Gene3D STAS domain 73 221 IPR036513 -
Sebi29g00180 286 PANTHER SULFATE TRANSPORTER 6 226 IPR001902 GO:0016020|GO:0055085
Sebi29g00180 286 MobiDBLite consensus disorder prediction 256 286 - -
Sebi29g00180 286 SUPERFAMILY SpoIIaa-like 95 217 IPR036513 -
Sebi29g00180 286 FunFam Sulfate transporter 31 73 220 - -
Sebi29g00180 286 Pfam STAS domain 94 213 IPR002645 -
Sebi29g00180 286 ProSiteProfiles STAS domain profile. 93 217 IPR002645 -
Sebi29g00180 286 MobiDBLite consensus disorder prediction 267 286 - -
Sebi29g00180 286 CDD STAS_SulP_like_sulfate_transporter 94 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00180 Sebi-Chr29 2466415 2470024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00180 4 223 Inorganic Solute Cotransporters AT5G13550 84.091 2.07e-131 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00180 K18059 - gmx:100794754 473.011