Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00176 ATGGAGTCCAAACATCAAACACCAAGTGTAATTTTAGAATTGATGGGACTTGATAAAGTGCCTCCCCAACATCCTGTTAGAGATAAACAGAAAGTGCTCTCTGGGAATTATCTGCAGAAAATTGCTTCTATTGGTGTTAGAAAGAAGCGATCATCTCACCAGCATCATTCCTTAGGAATGAGTACTGATGAAAAGGAAGAATCTGATGATGTTTCAAAAGTGGTCAAAACAATAAGGAGAAATAAGCACCATAACCCGTCGAATGGAAATGGGAAAGAGAACCCATATTTGTCCGGAACAAAGGTAAATGGTGTGCCACAACAGTTGTTGGATGCTTCAGTCAGGTGGAAGCCTGAAACCTTGGTTGATACCATTAGTCCATTCAATCTTGAAACAAGTGTGAATTCAGGGAGAATAGCTGAGCAGGGAAGTCTGCCACTTGAACAGAAAATGAATAATGGGTTGCAAAATGACATGCATGGAGAAGCTGGATTGTATGAAACATTTAGGCTTTCAAAATCTCAATTGGATCTGAAGGATGAAACTTTCGAATCAAGAATTACTGTTTTGAAAGCGAATCCTGAAAAGAGAGAAAATAGTTTAAAATATTTTTCATTTCCTAGTTCTTGCAGAAATCCTCATTTGGCTGATGGGCTGCTCAAAGAGATATTTTGTCCTAAAAGTACGAGAGTATATCCTGAAATGAGAGTTAGAAAGAAAATGTCCTATCACATGAAATTTGGTAAGCAGTGTTCAAGATCTTTTAGTAAAACTTCAGAGGAGGTTTCTGTGCAAAGGGGAAGTATTGCAAACAAAGTTTCAGATACCGTTTCAAGTTCAGTTTTTAGAGGGAATGAAGCATTTACCAAAAGTTCTGATATGCTGGATCCTGTTTCAGTTAATGAGATCCAATGCAATTCCCTGCTCTCCTGTTCTGATGGTTCCCATGTAGGTTATGAAGCCAAGCACAAGACTTTGGAACAGAGGGATGTGTCTGGAAAATTGCAAAAAGTTGGAAATGGAGCAAGGAATTTGAGTTATCAAAGTGGTTTTAGCAATGATAAAAATAGAAGGAACATTGGATGTAAGGTTGGTTTGAATTATAGCTTTGCCAGAAAAGTGCCAATGGCCAGACCTCTTTATACGGCTTCTGTTATTGCTGATAAATGTGAAACTATGACCAGGGACAACTTGTTTCAGAAATATTGGGGTTTGAGGAAGAATGAATCTGCAAATTGGTCAACCCAGAAGTCAAAGAATCAAGATATTAATCAGCAAGATTATTCAGAAGATTTGCACCTCAGGTCCAGCAGTGAGAAATCCCCTTCTTTTTCCACTTATTTTATTAGTAATCATACTGAAGAGGATTGTATTGGCCCTAATAAGTTGAAGAAGAGATGTTATGGGAATGATTTCTCTGCTGACAAACCTATGCTTCCTCATTTGTCAAGCTCTGGTCCTTCTCCTGCCTTCATAGACAGTCATATCTTGCAAGAGACACGCTTAACGAACAATGAAGTGAAGAACAATAAGCATGAAGACAGTAATATGTCCAAGCAAAGTGTTGTGTCTCCTGATTCATTAGTTGATTGCTTGGTGTCTGATGCAAAGACTCAGGTTGTTGGCTGGTCACCTAATAATCCAACCAAGCAGCAATCTGAATCAACAGCCTTCATTTTGACACATGGGGACAACGATTCTTTGAGTGATACTTTTTCTGCTTCAACACAACAGGATACATCAGAATTTCAAGAAGACTCACTTTGCTCTGGGGCTGACAAAGATTCCCTTGGTAGTTTTGAGGAGGCATACGAACCTAGTCCAATTTCAGTTTTGAATCCCTCATTTAGAGAAGACAATTCATTTAGCTCTGAATGTGGTGCTGGTGTATATGATTCCTCTGAAGTGGATGATGAAGGACTTGATTTGAATGTTTCAAGTGATGAAGATTGTGGGAATGAATCTATAGGGGGTGACTTTGAAGAAAAGAAAGAGATAGCAGGACTATCTAGAACTGAAGAAAGTAGAGATTTCTCCTATGTTGTTGAAGTCTTAACTGAGGCAGGTATATCTAATAGGAGCTTGTTCACAGACTTTTCTACATGGCACTCTGCAGAATGCCCTATTAGCCCTTCTGTCTTTGAAATCCTGGAAAAGAAATTTGGTGAGCAGCAACTATGGAAAAGATCTGAAAGGCGGCTTCTATTCGATCGCATTAATTTTGGGCTCTCAGATATTCTCCAGCCATATTTGTATGTTCCAATGTGGGAAAAGCCTGTGTCAAGAAGGTTGAATGGTGAACCAAGCCAGGACATGATTGAGGAGGAGATATGGGGGTTGCTTATTGCCAATGAAAAGAAAGCCAGTAAGGAATCAGGAGACAATATGCTTGGAGGGGAAATTAGGTGGATAGAACTAGGTGAAGATATTGAAGATATTGTTAGAGAGATAGTTAAGTTGTTAATAGAGGAGCTTGCAAACGAGATGGTTTGCTTGGAGAATTTTGGAGAAGTGTAG 2517 0.3909 MESKHQTPSVILELMGLDKVPPQHPVRDKQKVLSGNYLQKIASIGVRKKRSSHQHHSLGMSTDEKEESDDVSKVVKTIRRNKHHNPSNGNGKENPYLSGTKVNGVPQQLLDASVRWKPETLVDTISPFNLETSVNSGRIAEQGSLPLEQKMNNGLQNDMHGEAGLYETFRLSKSQLDLKDETFESRITVLKANPEKRENSLKYFSFPSSCRNPHLADGLLKEIFCPKSTRVYPEMRVRKKMSYHMKFGKQCSRSFSKTSEEVSVQRGSIANKVSDTVSSSVFRGNEAFTKSSDMLDPVSVNEIQCNSLLSCSDGSHVGYEAKHKTLEQRDVSGKLQKVGNGARNLSYQSGFSNDKNRRNIGCKVGLNYSFARKVPMARPLYTASVIADKCETMTRDNLFQKYWGLRKNESANWSTQKSKNQDINQQDYSEDLHLRSSSEKSPSFSTYFISNHTEEDCIGPNKLKKRCYGNDFSADKPMLPHLSSSGPSPAFIDSHILQETRLTNNEVKNNKHEDSNMSKQSVVSPDSLVDCLVSDAKTQVVGWSPNNPTKQQSESTAFILTHGDNDSLSDTFSASTQQDTSEFQEDSLCSGADKDSLGSFEEAYEPSPISVLNPSFREDNSFSSECGAGVYDSSEVDDEGLDLNVSSDEDCGNESIGGDFEEKKEIAGLSRTEESRDFSYVVEVLTEAGISNRSLFTDFSTWHSAECPISPSVFEILEKKFGEQQLWKRSERRLLFDRINFGLSDILQPYLYVPMWEKPVSRRLNGEPSQDMIEEEIWGLLIANEKKASKESGDNMLGGEIRWIELGEDIEDIVREIVKLLIEELANEMVCLENFGEV 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00176 838 PANTHER AFADIN 1 113 - -
Sebi29g00176 838 MobiDBLite consensus disorder prediction 45 101 - -
Sebi29g00176 838 MobiDBLite consensus disorder prediction 569 587 - -
Sebi29g00176 838 MobiDBLite consensus disorder prediction 569 595 - -
Sebi29g00176 838 MobiDBLite consensus disorder prediction 56 76 - -
Sebi29g00176 838 Pfam Domain of unknown function (DUF4378) 677 828 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00176 Sebi-Chr29 2438545 2443017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00176 589 830 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 33.588 8.80e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00176 - - lang:109354222 962.6