Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00145 ATGTCTTCTCTCCTTTGGAGTTCCATTGCAATGTGTGTAGCTGTCCTACTCCTACTCCTTCAACTATGTTACCTTGGACTTGCACACCCTTCTTCACACCCTGATAGGATCACTCACTTACCTGGTCAACCCCATGTTCAGTTTCATCAGTTTTCAGGTTATGTCACCATTGATAACAAAAACAACAGAGCACTGTTTTTCTACTTTGCTGAAGCTGAGAAAGATGCACTTTCCAAGCCCCTTGTTCTTTGGCTCAATGGAGGGCCTGGTTGTTCTTCTCTTGGGGTTGGTGCATTTTCAGAGAATGGACCATTTAGGCCTAAAGGAGAGGCCTTGGTCAGGAACCAATTCAGCTGGAACAGAGAGGCAAATATGTTGTACTTGGAAACGCCAATTGGAGTGGGGTTCTCTTACTCAACTGACACTTCCTCTTATGAGGCCAGGGATAATCTGGTGTTCTTGAAAAACTGGTTTGTAAGATTCCCAGAATACAGAAACAGAAGTTTATTCATTGTAGGAGAAAGCTATGCTGGTCATTATGTTCCTCAACTGGCTAAGCTTATGCTCCAATTCAACAAAAAGGAGAAGTTGTTCAATCTAAAAGGCATTGCTCTTGGCAACCCAGTTCTAGAATTTGCAACAGATTTCAATTCTAGAGCTGAGTTCTTCTGGTCTCATGGATTAATCTCAGACTTAACGTACAAAATGTTCACTTCTGTTTGTAACTATTCAAGATATGTGAGGGAATACTATAGTGGCTCTGTTTCTCCTATCTGTTCAAGTGTTATGAGCCAAGTTAGTACAGAAACTAGTAGATTTGTTGACAAGTATGATGTGACCCTTGATGTTTGTATATCTTCAGTGTTTGCACAAACCAAAGTCCTCAATCCCCAGCAAGTTACTGAAACGATAGATGTATGTGTGGAAGATGAAACAGTCAATTATCTGAATAGGAAAGATGTTCAATCAGCTTTACATGCACGTTTGGTTGGGGTACAAAGATGGTCTGCTTGCAGCAATGTCCTTGATTATGAGCTACGTGACTTGGAGATACCAACAATCACGGTTGTAGGCAAGCTAGTCAAGGCAGGAATACCAGTATTGGTCTACAGTGGTGATCAGGATTCAGTTATCCCATTGACTGGAAGCAGGACATTAGTACATCAATTGGCAAAAGAACTAAGATTGAAGACTACTGTGCCATATAGGGTCTGGTTTGAGGGGCAGCAGGTTGGTGGTTGGACTCAAGTTTATGGTGACATCCTTTCATTTGCCACCATTAGGGGAGCATCACATGAAGCTCCATTTTCACAACCTGAGAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAAGGCCAAGCTCTACCAGAAGAATTTTGA 1380 0.4196 MSSLLWSSIAMCVAVLLLLLQLCYLGLAHPSSHPDRITHLPGQPHVQFHQFSGYVTIDNKNNRALFFYFAEAEKDALSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEALVRNQFSWNREANMLYLETPIGVGFSYSTDTSSYEARDNLVFLKNWFVRFPEYRNRSLFIVGESYAGHYVPQLAKLMLQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDLTYKMFTSVCNYSRYVREYYSGSVSPICSSVMSQVSTETSRFVDKYDVTLDVCISSVFAQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSALHARLVGVQRWSACSNVLDYELRDLEIPTITVVGKLVKAGIPVLVYSGDQDSVIPLTGSRTLVHQLAKELRLKTTVPYRVWFEGQQVGGWTQVYGDILSFATIRGASHEAPFSQPERSLVLFKSFLEGQALPEEF 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00145 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Sebi29g00145 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Sebi29g00145 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Sebi29g00145 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Sebi29g00145 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Sebi29g00145 459 SUPERFAMILY alpha/beta-Hydrolases 37 455 IPR029058 -
Sebi29g00145 459 Gene3D - 307 343 - -
Sebi29g00145 459 Gene3D alpha/beta hydrolase 32 286 IPR029058 -
Sebi29g00145 459 FunFam Carboxypeptidase 353 452 - -
Sebi29g00145 459 Gene3D - 354 452 - -
Sebi29g00145 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 439 IPR001563 GO:0004185|GO:0006508
Sebi29g00145 459 FunFam Carboxypeptidase 30 456 - -
Sebi29g00145 459 Pfam Serine carboxypeptidase 42 452 IPR001563 GO:0004185|GO:0006508
Sebi29g00145 459 ProSitePatterns Serine carboxypeptidases, serine active site. 171 178 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00145 Sebi-Chr29 2003908 2007135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00145 315 455 Calmodulin-binding Proteins AT2G22960 26.950 6.49e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00145 K16297 - gmx:100805130 831.247