Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00142 ATGGCGTTGGAGCAACAAATTTCTAACCCTAACAACTCCGTTGACTCCCACCGTAACGGAGAGCCGCCGCCGTCCTCCGCCGCAGATGGCGGAGATGATGGGAGGCCAGCGGCGAGGCTGCCACGTTGGACGAGGCAGGAAATTCTGGTCCTCATACACGGCAAGGCCGACGCTGAGAGCCGGTTCAAGCCTGGCCGAGCCTCCGGTTCAGCGTCTGGTTTGAGCGAGCCGAAATGGGGGTTGGTATCGTCATACTGCAAGAAGCACGGTGTGAACCGGGAACCGGTTCAGTGCCGGAAGCGGTGGAGCAACCTCGCCGGCGATTATAAGAAGATTAAGGAGTGGGAGTCTAGGGTAAGGGATGAAACGGAGTCGTTTTGGCTGATGAGGAACGATTTGAGGAGAGAGAGGAAATTGCCGGGTTATTTTGACAAGGAGGTGTTCGATATTCTCGACGCGCCGTCGCAGGCGGCTGCCGCAGCGGCTCCATCTACTGCTACTGTGTCAGAGACGGTGGTGGTTGATGAGGAGGTGCACCTTTACGATAGTAATAGAAGGGTGGGGGGTGAAGATGGATTGTTCTCTGATGGTGAGAGGGACGAGGTTTTGGCTTCTACCAAAGATGTTCATGTTCCTGCCCCTGTTCCTATCTCAGAGGAGCAATATCAACCGCACCTCCATGGCTGCCAAGGGGAAGAAGGCAATGCTCAAGGTGTCACCAATGAGAAACAGCCAGCCTCAAATCCAGAAATGGGTTCTACATCACAAGGGGGACGAAAGAGGAAGCGGTTTGAAAACGATGGGGAGGAAGAAACTTTGCAAAGTCAATTAATTGATGTGTTGGAAAAAAATGGCAAGATGCTACGTGATCAACTTGAGGCTCAGAACATCAATTTCCAGTTGGACCGCCAGCACCAGAAAGACACTGCAAGTAACATAGTTGCTGTACTTGATAAGCTTGCAGATGCTCTAGGGAGAATTGCTGATAAATTGTAG 996 0.5231 MALEQQISNPNNSVDSHRNGEPPPSSAADGGDDGRPAARLPRWTRQEILVLIHGKADAESRFKPGRASGSASGLSEPKWGLVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESRVRDETESFWLMRNDLRRERKLPGYFDKEVFDILDAPSQAAAAAAPSTATVSETVVVDEEVHLYDSNRRVGGEDGLFSDGERDEVLASTKDVHVPAPVPISEEQYQPHLHGCQGEEGNAQGVTNEKQPASNPEMGSTSQGGRKRKRFENDGEEETLQSQLIDVLEKNGKMLRDQLEAQNINFQLDRQHQKDTASNIVAVLDKLADALGRIADKL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00142 331 Coils Coil 278 298 - -
Sebi29g00142 331 ProSiteProfiles Myb-like domain profile. 35 106 IPR001005 -
Sebi29g00142 331 MobiDBLite consensus disorder prediction 234 255 - -
Sebi29g00142 331 MobiDBLite consensus disorder prediction 1 20 - -
Sebi29g00142 331 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 3 331 - -
Sebi29g00142 331 Pfam Myb/SANT-like DNA-binding domain 42 128 IPR044822 -
Sebi29g00142 331 MobiDBLite consensus disorder prediction 256 270 - -
Sebi29g00142 331 MobiDBLite consensus disorder prediction 226 271 - -
Sebi29g00142 331 Gene3D - 43 111 - -
Sebi29g00142 331 MobiDBLite consensus disorder prediction 1 41 - -
Sebi29g00142 331 CDD GT1 41 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00142 Sebi-Chr29 1977164 1979917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00142 42 114 Trihelix Transcription Factor Family AT1G33240 32.877 5.83e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi29g00142 Myb_DNA-bind_4 8.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00142 - - gmx:100788594 490.73