Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00131 ATGGATGCTCGCCGAGCTCCACGCGCCGTCATTGACCCCAAGGTTCGCAAAGTCGGGTTCTTCGCCCCACCCGAAAATCCTCAAACGGCTCAACCCGACCCGTTTTCGTTCGACATTTCTCCATCCGCCAACTCACTCTCTCCGGTCATGATCCCGCCGCCGCTTCACTCGTCGGAAAATCTCAATCTCCATGCTCGCCCCGCCGCTGCTGCCGCAGTTTCCCCTTCCGGCGAGGAATCCTCCGCCGCCGCACGGAGCTATAGCAGCAGCTCATCGGAGCTCTTCCCTGCTCCGATGTCCCCCGCACCGTCTTCCTACTCGAGCAGGACCTTTGTCGGCGGCGATGGAGATTTCTTCTTCGATGGCGCTGCTGCATCTCCGCGTCGCCGAGGCAGCGGTGGAGGAAAGGTGGCGTCGTCATTTCCTCGCGGCGGATTCGACTTGACGGCGATGAAAGCGAGTAGCGTTCCTGCAAGTGAATTGACGACAGTTTCGGTGGTGAATGCTGCTGCTTCCCTTGCAATTCACGCAAGAGCTTTGTTGGACACACCATCAGAAAGAGAAAAAACAGGCAAAGGAGGAGGGTCAACAATGGAAGTGAAAGACCAAGCTATGAATGCACAACCGAAGAAAGATAAGACCACAAAGGCTGAAAGACGTGCCCTTCAAGAAGCTCAGCGAGCTGCAAAGGCTGCTGCAAAAGCTGAAGGAAATAAAGCATCTGGAACTGTGACTTCAGTGAATGCAAAATCAGCTAAAATTGCCAAGCCCCCGCAGAAAGTTGATAATGCTTCAGTTGCTGCCTCTGAGAAGAAGGGAGGTGACCGTCCATCAGAAAAGGATAGAAAGAAAGATGTTCCTCAATCACGCATGCAATATGATGATAAGAGCAGAGTGGAGAAGGCTAAGCGGCGTGCTGTGGTAAAACAAACTGAAGCCAGGAACAGAGTTGAACTGTTCAGGCATTTGCCACAGTATGAACATGGGAGTCAGCTTCCTGATCTTGAAGTGAAGTTTTTCCAGCTGGATCCTGTGCATCCTGCAATTTATAAGGTGGTGGGTTTGCAGTATCTGTCTGGAGATATATCTGGTGCTAATGCTCGTTGTATTGCTATGCTTCAAGCATTTCAAGAGGCCATCAAAGACTACAGAGTTCCCCCTGAGAAGACTCTTGTGAGAGACTTGACAGCAAAAATAAGTAGCTATGTTTCATTCCTTATTGAGTGTCGACCTCTTTCTATCAGCATGGGAAATGCAATTAGATTTGTTAAAAGTCGAATTGCCAAGCTACCTCTGACACTGTCTGAGTCAGAATCAAAAACTTCTCTTCAGTCAGATATTGAGCGTTTCATAAATGAGAAGATTATACTTGCTGACAAGGTGATAGTTAAGCATGCTGTCACAAAAATAAGAGATGGGGATGTTCTTCTTACTTATGGGTCGTCATCAGCAGTTGAAATGGTACTATTACATGCACATGAGTTAGGAAAACAGTTTCGAGTTGTAGTAGTAGACTCTCGTCCTAAGCTTAGAGGGAAACTTTTGCTTCGTAGGCTGGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTCGAGTTTTTCTGGGTGCTTCATCAGTTTTGGCTAATGGAACAGTGTATTCAGGAGTTGGGACTGCATGTGTTGCAATGGTTGCTCATGTGTTCTGTGTCCCTGTTATAGTATGTTGTGAGGCTTATAAGTTTCATGAAAGGGTACAGCTTGATTCAATATGCTCAAATGAACTCGGTGATCCGGATGTCATTTCAAAGGTTCATGGTAGAGAGGATGTTAACCTCTTGGATGCTTGGGCCAAAACTGAAAATCTGCAACTTCTAAATCTGATGTATGATGCAACACCTTCAGATTATGTTTCAATGATAGTCACAGATTATGGCATGGTCCCCCCTACAAGTGTTCCTGTAATTGTAAAGGAATATAGTAGAGAACAGGTGTGGATGTGA 2016 0.4678 MDARRAPRAVIDPKVRKVGFFAPPENPQTAQPDPFSFDISPSANSLSPVMIPPPLHSSENLNLHARPAAAAAVSPSGEESSAAARSYSSSSSELFPAPMSPAPSSYSSRTFVGGDGDFFFDGAAASPRRRGSGGGKVASSFPRGGFDLTAMKASSVPASELTTVSVVNAAASLAIHARALLDTPSEREKTGKGGGSTMEVKDQAMNAQPKKDKTTKAERRALQEAQRAAKAAAKAEGNKASGTVTSVNAKSAKIAKPPQKVDNASVAASEKKGGDRPSEKDRKKDVPQSRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEVKFFQLDPVHPAIYKVVGLQYLSGDISGANARCIAMLQAFQEAIKDYRVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFVKSRIAKLPLTLSESESKTSLQSDIERFINEKIILADKVIVKHAVTKIRDGDVLLTYGSSSAVEMVLLHAHELGKQFRVVVVDSRPKLRGKLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLANGTVYSGVGTACVAMVAHVFCVPVIVCCEAYKFHERVQLDSICSNELGDPDVISKVHGREDVNLLDAWAKTENLQLLNLMYDATPSDYVSMIVTDYGMVPPTSVPVIVKEYSREQVWM 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00131 671 Gene3D - 458 664 IPR042529 -
Sebi29g00131 671 MobiDBLite consensus disorder prediction 31 46 - -
Sebi29g00131 671 MobiDBLite consensus disorder prediction 19 108 - -
Sebi29g00131 671 MobiDBLite consensus disorder prediction 272 307 - -
Sebi29g00131 671 Pfam Initiation factor 2 subunit family 362 654 IPR000649 GO:0044237
Sebi29g00131 671 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 40 668 - -
Sebi29g00131 671 MobiDBLite consensus disorder prediction 79 108 - -
Sebi29g00131 671 MobiDBLite consensus disorder prediction 182 307 - -
Sebi29g00131 671 MobiDBLite consensus disorder prediction 205 225 - -
Sebi29g00131 671 SUPERFAMILY NagB/RpiA/CoA transferase-like 316 664 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00131 Sebi-Chr29 1800296 1806012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00131 1 671 Eukaryotic Initiation Factors Gene Family AT5G38640 64.604 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00131 K03680 - gmx:100785938 951.429