Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00087 ATGACGATTGGTAGTCTTGCACCTAAGACAGAGAAGAAGAAATCACGAAAGAACAAGGCAGTTGTTGATGAGAATGCACCCTTGTTGCCTAAAAGCCAAGAGAGTGATGCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTTAACTTATCCACTACAATTATTGGTGCTGGGATCATGGCCTTACCTGCAACCTTGAAACAGTTGGGGATGGTGCCTGGCCTTCTTGCAATCCTCATCATGGCTCTATTGACAGAGAAGTCAATTGAGCTTTTGCTTAGGTTTACCAGGGCAGGAAAGGCTGTTTCTTATGCTAGTCTGATGGGGGATTCCTTTGGGAAATATGGAAAAGCTCTGGTGCAGATATGTGTTATAATCAATAACATTGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCAGGTGGAGATCATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACAGGGCGGACATTTATTGTCCTTCTTACAACAGTTGCTATATTTGCACCTCTGGCAAGCTTTAAGCGAATTGATTCATTGAGATTCACATCGGCCCTTTCAGTTGCACTAGCAGTTGTTTTTCTTGTCATTGCTGTGGGAATCTCAATTGTCAAGATTATAAGTGGAGGCATTAGCATGCCCAGACTCTTCCCAGTCGTTACTGATCTACCATCAATCTTTGAATTATTCACTGTTGTTCCTGTGTTTGTGACTGCCTATATCTGCCACTACAATGTTCACAGCATAGATAATGAACTTGAGGACTCCTCACAGATGCAAGGGGTTGTACGCACCGCCCTTGGTCTATGCTCTTCAGTGTACTTAATGATCAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGATACCGATCTTGGAATCCCTTTCGGTTCTGTGCTCAATGATGCTGTTCGTATAAGCTATGCTGCTCACCTCATGCTTGTATTTCCAGTTGTTTTCTATCCATTGCGGCTCAATATTGACGGTCTCTCCTTCCCAAAATCAAGGCCCTTGGTTCTTGATAACTTCCGATTTGCATCAGTCACTATTGCCCTTATCGGTGTTATCTTCCTGGGAGCAAATTTCATACCTAGTATTTGGGATGCTTTCCAGTTCACAGGAGCAACCGCCGCAGTCTGTATTGGATTCATATTTCCAGCTGCCATCACTCTTAGGGACCGCTACAACATAGCAACTAAATCAGACAAGATTCTGTCTATCATTATGATAGTCCTGGCAGTATTCTCAAACGTTGTGGCTATTTACAGTGATGCCTATGCCTTGATCAAGCAGAATAAGTCCAAACGTGAATGA 1392 0.4303 MTIGSLAPKTEKKKSRKNKAVVDENAPLLPKSQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMVPGLLAILIMALLTEKSIELLLRFTRAGKAVSYASLMGDSFGKYGKALVQICVIINNIGVLIVYMIIIGDVLSGTSSGGDHHYGILEGWFGVHWWTGRTFIVLLTTVAIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGISIVKIISGGISMPRLFPVVTDLPSIFELFTVVPVFVTAYICHYNVHSIDNELEDSSQMQGVVRTALGLCSSVYLMISFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLSFPKSRPLVLDNFRFASVTIALIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKSDKILSIIMIVLAVFSNVVAIYSDAYALIKQNKSKRE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00087 463 MobiDBLite consensus disorder prediction 1 25 - -
Sebi29g00087 463 PANTHER AMINO ACID TRANSPORTER 43 442 - -
Sebi29g00087 463 Pfam Transmembrane amino acid transporter protein 45 449 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00087 Sebi-Chr29 1149498 1152350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00087 3 462 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.261 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00087 K14207 - gmx:100796345 804.283