Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00062 ATGCTCAAGACTCTTGATAGATACCAGAAATGCAGTTATGGTGCTGTGGAAGTTAGCAAACCTGCCAAAGAACTTGAGCAGAGCAGCTACCGTGAATACTTGAAGCTGAAAGGAAGATTTGAATCTCTTCAAAGGACCCAGAGAAACCTTCTAGGGGAAGACTTGGGCCCACTGAATTCCAAAGAACTTGAGCAGCTTGAACGGCAATTGGATTCATCTCTGAAGCAAGTGAGGTCCACAAAGACACAATTCATGCTGGACCAATTAGCTGATCTTCAAAATAAGGAACAGATGTTGGTAGATGCAAACAGAACCTTAACAATGAAGCTGGATGAAATCAATTCAAGAAATCAATACAGGCAACCATGGGAAGCTGGTGATCAAAGTATGCAATATGGTGGTCCACAGAATGCTCACTCTCAGGGCTTCTTCCAGCCATTGGAATGCAATCCCACATTGCAGATTGGTCCTGACTACAGGTACAACACTGTAGCTTCAGATCAGATAACTGCCACAACTCAAGCTCAACAAGTGAATGGGTTTATTCCTGGATGGATGCTTTGA 564 0.4344 MLKTLDRYQKCSYGAVEVSKPAKELEQSSYREYLKLKGRFESLQRTQRNLLGEDLGPLNSKELEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEQMLVDANRTLTMKLDEINSRNQYRQPWEAGDQSMQYGGPQNAHSQGFFQPLECNPTLQIGPDYRYNTVASDQITATTQAQQVNGFIPGWML 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00062 187 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi29g00062 187 Pfam K-box region 26 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi29g00062 187 Coils Coil 63 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00062 Sebi-Chr29 786589 788422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00062 1 187 MADS-box Gene Family AT5G15800 68.812 1.19e-76 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00062 K09264 - gmx:100786066 337.035