Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00047 ATGGCTGTCTTCATGGCAATTTTTGGTGTTGTCTTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAAGTGGAATGAAGTAAGATACAGGATGAAAGGTTTGCCTCCAGGTACAATGGGCTGGCCTGTTTTTGGAGAGACAACTGAGTTTCTTAAGCAAGGTCCTAACTTTATGAAAAACCAGAGGGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTAGGCTGTCCTACCATTGTATCCATGGATCCAGAACTTAATAGATACATACTGATGAATGAAGCAAAAGGGCTTGTTCCTGGATACCCACAATCCATGTTAGATATCTTAGGCAAATGCAACATAGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCACTCCTTTCCATCATTAGCCCCACCCTCATCAGAGATCAGCTTTTACCAAAAATTGATGAGTTCATGAGAACCCACTTAAGTGATTGGGATAACAAAGTCATCAACATTCAAGAGAAAACTAAAGAGATGGCATTTCTCTCATCCTTGAAGCAGATTGCTGGTATGGAATCAAGCTCAATATCTCACCCATTCATGACAGAATTCTTTAAGCTAGTTTTAGGAACTCTCTCCCTCCCTATTGATCTTCCTGGCACAAATTATCGCCGTGGATTACAGGCAAGGAAGAGAATTATCAGCATTCTGAGTAAGCTGCTAGAGGAAAGGAGAGCATCCCAAGAAACCTATGTAGACATGCTTGGTTGTTTGATGGGAAGAGATGATAACAATCGATACAAACTAACTGATGAGGAAATCATTGATCTAATTATTACAATTATGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCTGTGAAGTACCTCCATGACCATCCCAAAGTTCTTGAAGAAATCAGAAAAGAGCATTTTGCCATAAGAGAGAGGAAAAAGCCAGAGGATCCAATTAACTGTGATGATCTCAAGTCAATGAGGTTTACTCGTGCGGTGATTTTTGAGACCTCGAGATTAGCTACAATAGTTAATGGGGTTCTGAGAAAAACAACTCATGACATGGAATTGAATGGCTATTTGATTCCTAAAGGATGGAGGATATATGTATATACAAGAGAGATCAATTATGACCCATTTCTGTATCATGATCCACTAACTTTTAACCCATGGAGATGGCTGGGTGGTAACAGTCTAGAGTCACAAAGTCACTTCTTGATATTTGGAGGAGGCACCAGACAATGTCCAGGAAAAGAGTTGGGGATAGCAGAAATTTCCACTTTCTTACACTACTTTGTAACTAGATACAGATGGGAAGAAGTAGGAGGAGATAAACTAATGAAATTTCCTAGAGTTGAGGCACCAAATGGACTACACATAAGGGTCTCATCTTATTAA 1398 0.4006 MAVFMAIFGVVLVLCFCSALLKWNEVRYRMKGLPPGTMGWPVFGETTEFLKQGPNFMKNQRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMRTHLSDWDNKVINIQEKTKEMAFLSSLKQIAGMESSSISHPFMTEFFKLVLGTLSLPIDLPGTNYRRGLQARKRIISILSKLLEERRASQETYVDMLGCLMGRDDNNRYKLTDEEIIDLIITIMYSGYETVSTTSMMAVKYLHDHPKVLEEIRKEHFAIRERKKPEDPINCDDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPLTFNPWRWLGGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVEAPNGLHIRVSSY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00047 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Sebi29g00047 465 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 FunFam Cytochrome P450 85A1 24 464 - -
Sebi29g00047 465 Pfam Cytochrome P450 34 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 Gene3D Cytochrome P450 24 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 SUPERFAMILY Cytochrome P450 27 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi29g00047 465 PANTHER CYTOCHROME P450 26 31 443 - -
Sebi29g00047 465 CDD CYP90-like 60 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00047 Sebi-Chr29 608660 611921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00047 81 465 Cytochrome P450 AT5G38970 69.948 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00047 K09590 - gmx:100785414 864.759