Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00045 ATGAGGCTTGTCATATCAGTTCTCTGTGTTATTGTGCTATTTTCATATGCAGCTGCATATGATCCTTTAGATCCCAATGGAAACATAACGATCAAATGGGATGTTGTGTCTTGGACACCAGATGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTACCGGCATATCATGAATCCAGGATGGACCTTGGGATGGTCATGGGCTAAGAAAGAAGTTATATGGTCCATGGTAGGAGCTCAAACCACAGAGCAAGGAGACTGTTCTAAGTTCAAAGGCAATGTGCCTCATTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTACCTTACAATCAACAATTCTCAAACTGCTGTAAAGGTGGAGTGGTGGCAGCATGGGGCCAAGATCCTTCATCAGCTGTCTCATCCTTCCAAGTGAGTGTTGGACAAGGTGGTACTTCAAACAAGACAGTTAAACTCCCCAAAAACTTCACTCTCCTGGCTCCAGGACCAGGCTATACTTGTGGTCCTGCCAAGGTTGTTCCTTCCACTGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTTATGACATGGAATGTTACCTGCACATACTCACAATTTCTGGCAAGAAAGAATCCAAGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAGACCATTACCCCTTGTCCCACTTGTGCCTGTGGCTGCCAGAACAAGAAGAATTGTGTCAAGAGTGACTCCAAATTTCTCAGCACAGTGGGGATCCACACTCCAAAGAAAGAAAATGAACAACTACTACAGTGTACTCATCACATGTGCCCCATCAGGGTACACTGGCATGTGAAGCTCAACTATAAGGACTATTGGCGAGTCAAGATTGCCGTGACAAATTTCAATTACAAGATGAATTACTCTCTCTGGACTCTAGCAGTTCAGCATCCAAATCTTAACAATGTCACTGAAGTTTTCAGCTTTGATTACAAGCCTTTGGTTCCCTATGAGTCCGTGAATGACACTGGTATGTTCTATGGCATGAAATACTTCAATGATCTCCTAATGGAAGCTGGACCAAGTGGGAATGTTCAATCAGAAGTGCTTCTTCAGAAGGACAAAGATACATTCACATTCAAGCAAGGATGGGCATTTCCTCGCAAGGTTTACTTTAATGGTGAAGAATGCTTGATGCCTCCACCAGATACCTATCCAATCCTCCCAAATTCTGCCCTTGTAAACCTACATAACTTCCCAGTATTCATCTTCTCAATGCTTGTCTTTCTAGCTATTTGGTGA 1296 0.4367 MRLVISVLCVIVLFSYAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMYRHIMNPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSSAVSSFQVSVGQGGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPTCACGCQNKKNCVKSDSKFLSTVGIHTPKKENEQLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAVTNFNYKMNYSLWTLAVQHPNLNNVTEVFSFDYKPLVPYESVNDTGMFYGMKYFNDLLMEAGPSGNVQSEVLLQKDKDTFTFKQGWAFPRKVYFNGEECLMPPPDTYPILPNSALVNLHNFPVFIFSMLVFLAIW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00045 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
Sebi29g00045 431 PANTHER PROTEIN COBRA 6 423 IPR006918 GO:0010215|GO:0016020
Sebi29g00045 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00045 Sebi-Chr29 574720 576854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00045 1 430 COBRA Gene Family AT3G29810 63.781 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00045 - - gmx:100783410 862.062