Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00044 ATGGGCTTCTCTTTGTTATCCACAGCAAGTCCTTGCATTTTGCTCTTGTTTCTACTGTCTTGCACTTGCTTCACTTCAACAGATGCTTATGATCCACTTGATCCAAACGGGAATATCACAATCAAATGGGATATTATAAGTTGGACCCCTGATGGTTATGTTGCTGTTGTTACAATGAACAACTTCCAACAATATCGTCACATTGCTTCACCTGGCTGGACACTAGGATGGACATGGGCAAAAAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAAATGTTCCACATTGCTGTAAAAAGGACCCAACAGTTGTAGATTTACTTCCTGGAACTCCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGTGGGGTGCTAAGCTCATGGGCGCAGGATCCAACCAATGCAGTATCATCATTTCAAGTCAGTGTTGGTAGAGCTGGAACCACAAACAGAACTGTCAAAGTCCCCAAAAACTTCACCTTGAAAGCACCAGGACCGGGTTATACTTGTGGGCCAGCAAAAATTGTGAGACCCACTCAATTCATTCAACCAGACAAAAGGAGAGTGACCCAAGCACTCATGACATGGAATGTGACATGCACATATTCACAATTTCTAGCTCAGAAAACTCCCACCTGCTGTGTTTCTCTCTCCTCTTTCTATAATGATACCATTGTACCCTGCCCAACATGTGCATGTGGCTGCCAGAGTAACTCATCTCAGTCAGGGAGCTGTGTAAATGCAGATACGCCACATCTGGCATCAGTTGTTTCTGGCGTCGGAAAGAATAATTTGGCACCTTTGGTTCAATGTACTAGTCACATGTGCCCTATCCGAATCCACTGGCATGTTAAGCTTAACTACAAGGAGTATTGGCGTGTGAAGGTTACTATTACTAATTTTAATTTCCGTATGAATTATTCTGAGTGGAACTTGGTTGTTCAACACCCAAACTTCGACAATCTGACTCAGCTATTCAGTTTCAACTACAAGTCATTAACTCCTTACGGTTCAATAAATGACACAGCAATGCTTTGGGGAGTCAAGTTCTACAATGATTTTCTCAATCAAGCTGGCCCTAATGGTAATGTTCAATCAGAGCTACTCTTCCGAAAGGATAAAGCAACTTTTACTTTTGACAAGGGCTGGGCTTTTCCTAGGAGGATCTACTTCAATGGTGACAACTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCTAATGCTGGTTCAAGGCAAGAGGTTTCCTTGTTTGCTTTAGTGATGACCTCTTTGGTAGCCTTGTTATTTTATGCATATGCATAA 1347 0.4254 MGFSLLSTASPCILLLFLLSCTCFTSTDAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIASPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTNAVSSFQVSVGRAGTTNRTVKVPKNFTLKAPGPGYTCGPAKIVRPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCACGCQSNSSQSGSCVNADTPHLASVVSGVGKNNLAPLVQCTSHMCPIRIHWHVKLNYKEYWRVKVTITNFNFRMNYSEWNLVVQHPNFDNLTQLFSFNYKSLTPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRQEVSLFALVMTSLVALLFYAYA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00044 448 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0016020
Sebi29g00044 448 PIRSF COBRA 3 448 IPR006918 GO:0010215|GO:0016020
Sebi29g00044 448 PANTHER PROTEIN COBRA 18 438 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00044 Sebi-Chr29 570856 574045 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00044 1 443 COBRA Gene Family AT3G02210 75.056 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00044 - - gmx:100783820 880.937