Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00042 ATGTCGTCACATTGCTTCACCTGGATGGTCACTAGGATGGACATGGGCAAAAAAGGAGATTTACTTCCCGGAACACCTTACAACAAGCAAGTTGCACATTGTTGCAAAGCTGGGGTGCTTAGCTCATGGCTACAGGATCCAACCAATTCAGTGGCATCATTTCAAGTCACTGTTGGTGAAGCTGGAACCACGAACAGAACTGTCAATCTCCCCAAAAACTTCACCTTGAAAACACCAGGACCAGGTTCTACTTGTGGACTAGCAAAAATTGTGAGACCCACAAAAATCACTCAACCAGACAAAAGGAGAGTAACCCAAGCACTCAGTGAGTTAAAGGACTTTACTATTCATTTTCACAGTTGTCAAATATAA 372 0.4328 MSSHCFTWMVTRMDMGKKGDLLPGTPYNKQVAHCCKAGVLSSWLQDPTNSVASFQVTVGEAGTTNRTVNLPKNFTLKTPGPGSTCGLAKIVRPTKITQPDKRRVTQALSELKDFTIHFHSCQI 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00042 123 PANTHER PROTEIN COBRA 20 110 IPR006918 GO:0010215|GO:0016020
Sebi29g00042 123 Pfam COBRA-like protein 20 109 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00042 Sebi-Chr29 544599 545072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00042 20 108 COBRA Gene Family AT3G02210 68.539 6.45e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00042 - - gmx:100782876 151.369