Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00040 ATGGCCCAATCGTTCGGCCAGACCGAGATTAACTGGGAGAAGCTAGATAAAACTAAGTTCTATGTGGTAGGAGCTGGACTCTTTACAGGTGTTACTGTTGCACTTTACCCAGTTTCAGTTGTGAAAACTAGGCTGCAGGTTGCTACAAAGGATGCTGTAGAGAGAAATGCATTTTCTGTTGCAAAGGGATTGGTTAAAACTAATGGCATCCCTGGTTTGTATAGAGGGTTTGGCACAGTTATCACAGGTGCAATTCCAGCCAGAGTCCTATTCCTCACTGCTCTAGAGACCACAAAGGTGACTGCCTTTAGAATGCTGGAACCGTTTAGACTATCTGAAACTACCCAAGCTGCCATAGCAAATGGAGTTGCAGGCATGACATCGTCGCTTTTTGCTCAATTTGTGTTTGTTCCGATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCTCAATACAGCGGGGGTTTGGATGTTGCTCGTAAGGTTTTAAGGTCTGATGGCATCCGGGGACTGTATCGAGGGTTTGGTCTCTCGGTTGTTACTTATTCACCTTCTAGTGCAGTATGGTGGGCAAGTTATGGTTCAAGCCAACGCTTCATTTGGAGATTCTTGGAACATGGTACCAAAAATGATGAAGGCACTCCTAGTCTGCAGAAGATAATGTTAGTTCAGGCTGCTGGAGGGATTATTGCTGGTGCAACTGCATCCTGCATTACAACCCCGTTGGATACTATCAAGACACGATTACAGGTGTTTGGCATACTCCCTAGCAAGTTCCAAGTTCCTATTAGCAATCACTATTCACTAGTGCCTTCTAAGGGATGCTTAGAAATGAGGAAGTTTGCTGTTTGA 867 0.4498 MAQSFGQTEINWEKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVATKDAVERNAFSVAKGLVKTNGIPGLYRGFGTVITGAIPARVLFLTALETTKVTAFRMLEPFRLSETTQAAIANGVAGMTSSLFAQFVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKVLRSDGIRGLYRGFGLSVVTYSPSSAVWWASYGSSQRFIWRFLEHGTKNDEGTPSLQKIMLVQAAGGIIAGATASCITTPLDTIKTRLQVFGILPSKFQVPISNHYSLVPSKGCLEMRKFAV 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00040 288 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 257 - -
Sebi29g00040 288 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Sebi29g00040 288 SUPERFAMILY Mitochondrial carrier 13 260 IPR023395 -
Sebi29g00040 288 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Sebi29g00040 288 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Sebi29g00040 288 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Sebi29g00040 288 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 288 IPR018108 -
Sebi29g00040 288 Pfam Mitochondrial carrier protein 119 205 IPR018108 -
Sebi29g00040 288 Pfam Mitochondrial carrier protein 25 100 IPR018108 -
Sebi29g00040 288 Pfam Mitochondrial carrier protein 228 256 IPR018108 -
Sebi29g00040 288 Gene3D Mitochondrial carrier domain 7 152 IPR023395 -
Sebi29g00040 288 Gene3D Mitochondrial carrier domain 153 272 IPR023395 -
Sebi29g00040 288 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00040 Sebi-Chr29 531647 534911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00040 10 258 Chloroplast and Mitochondria Gene Families AT5G15640 75.600 6.95e-137 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00040 K15121 - gmx:100781796 458.759