Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00037 ATGAAACGGGTTAAAGCGAAATCCAGCAAAGAGATCCTTGAATTAAAGAACGAAATTGAGTTGCTCTGTCAGCTTCGTCACCCAAATTTGATATCTCTTATAGGATTTTGTGACCACAAAGAAGAGATGATTGTTGTGTATGAGTACATGCCCAATGGTAGTCTTTATGATCACCTATATTGTAGTGATACGAAAATAAAACCACTCACATGGAAGCAAAGGCTAAAGATTTGCATGGGAGCAGCATGTGGACTACACTACCTTCACACAGGAGCCAAGCGCACCATTTTTCACCGTGACATAAAACCCCATGACATTCTTTTGGATAACAATATGTTGCCAAAGCTCGGAGATTTCAGAATTTCCTTGCAAGGTCCTCGTTTTATGTCGAAGCCAAAACCAATTGAAGTAAAATCTGTTTTAGGTACTTATGGTTATATGGCTCCCGAGTATGTCATGAAGAAGACCTTCACAGAGAAATGTGACGTTTACTCATTTGGTATGGTTCTGCTAGAAGTGGTATGCGCAAAGGACAAGCAAACAATTTTTGATAAGATGACCAAGTTAAAGCATGATTTGGAACCTGTTGAAAGAGAAGATTTAGAAAGGTTTAGTGCTTGCAGTTGCAGTGTAGCTATAGTGCTTATACGTTCCTTTGTGGAAAGGTATCCAGTTGAGGAGATTATAGAACCAATTCTTATGGGAAAGATTGCGCCAGAATGTTGGGAAGTATTCATGGATATCATCGTAAGATGCTTGGAGTTTGATCCAAATGAGAGACCAATAATGGGTGAGGTGGAGGTGCAACTAGAGCATGCTCTGTCATTACAGGAAGAAGCAGATATCAGAAAGACTTGTGATGATTATACCTTACTATCTACCACCATTATTAACTCTCAGACCCGCAGAGATCCAGTGAATGGCTTTGACTTTTGTGGTGAGAGTGGGACACACACAGAGCTCACAGCTCATGGAGAAGTTTCCTCATTTCTTTCGAGGAAGCGCAATCCAACAATAATAGAAGAGTTATGCCCTCAATTTTCTCTGGCCGATCTGAGGAAATCAACCAACAACTTCGATGAGAATCGAATAATAGGAAGAGGATACTTTAGTTTAGTATATAAAGGTCGTCTCCAATACAATTGTACACATTATACAGTTGCAGTGAAGCGAATTAAGGATTCTAAAAAAGGATTGGAAGAGTTCAAGAAAGAAATCGAGTTGCTCTGCCAGCTTCGTAACCCTAATTTGGTCACTCTCATAGGATTCTGCAACCACAAAGATGAGAAGATTCTCGTATATGAGTACCTCCCTAATGGATCTCTCCGCGATCATCTATTCAATAGGGAGAAGGAATTACCTCTGTCATGGAAGAAAAGGTTAGAGATCTGCATAGGAGCAGCACGCGGAGTGCACTACTTCCACACAGGAGCCAGACGCACTATCTTTCACCTTGACATCAATTTGGGAAACATTCTTCTGGATAGCAATATGGTACCCAAACTCACAGATTTCTGGTTTTCCTTACAGGGACCTCTATCCACATCAAAGCCTAAACCAATTGAAGTAAACAGAATTTGCGGTACATCTGGTTACATGGCCCCTGAGTATGCTTTATATGGCACGGTGACAGATAAATGTGACGTTTATTCATTTGGTGTGGTTCTACTAGAAGTGGTATGTGCAAAGTCAATTTTTAAAATTTTGAAACAGATCTACGAGTGTGAGCTCCCAAGTGAAGAATTAGAAATGTCTAACCGTTCAGAAGCTTCATATGGTACTAGTAGTAGTATGCCTTTTCACATTATGCGAAGACAGCTCATAGCTCATAGCTATAATGATGCGCCTCTAGCAGGGAAAATTGCACCAGAGTGTTGGGAAGTATACATAGATATCATAGATGGTTGCTTGAAGGATGAACCAAATGATCGACCAACGATGGGTGAAGTGGAGGTGGAACTTGAACGTGCTCTTACTTTGCAACTGGAAGCTGATGCCAGGAATACTACTGCTGCTGATTATTATAGCTTATTAGCCAACAGCACTACTAAAACTCAACAAGAAGAGGCGCCAATTTCAGCCTAA 2085 0.4067 MKRVKAKSSKEILELKNEIELLCQLRHPNLISLIGFCDHKEEMIVVYEYMPNGSLYDHLYCSDTKIKPLTWKQRLKICMGAACGLHYLHTGAKRTIFHRDIKPHDILLDNNMLPKLGDFRISLQGPRFMSKPKPIEVKSVLGTYGYMAPEYVMKKTFTEKCDVYSFGMVLLEVVCAKDKQTIFDKMTKLKHDLEPVEREDLERFSACSCSVAIVLIRSFVERYPVEEIIEPILMGKIAPECWEVFMDIIVRCLEFDPNERPIMGEVEVQLEHALSLQEEADIRKTCDDYTLLSTTIINSQTRRDPVNGFDFCGESGTHTELTAHGEVSSFLSRKRNPTIIEELCPQFSLADLRKSTNNFDENRIIGRGYFSLVYKGRLQYNCTHYTVAVKRIKDSKKGLEEFKKEIELLCQLRNPNLVTLIGFCNHKDEKILVYEYLPNGSLRDHLFNREKELPLSWKKRLEICIGAARGVHYFHTGARRTIFHLDINLGNILLDSNMVPKLTDFWFSLQGPLSTSKPKPIEVNRICGTSGYMAPEYALYGTVTDKCDVYSFGVVLLEVVCAKSIFKILKQIYECELPSEELEMSNRSEASYGTSSSMPFHIMRRQLIAHSYNDAPLAGKIAPECWEVYIDIIDGCLKDEPNDRPTMGEVEVELERALTLQLEADARNTTAADYYSLLANSTTKTQQEEAPISA 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00037 694 SUPERFAMILY Protein kinase-like (PK-like) 2 275 IPR011009 -
Sebi29g00037 694 ProSiteProfiles Protein kinase domain profile. 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi29g00037 694 Gene3D Phosphorylase Kinase; domain 1 323 436 - -
Sebi29g00037 694 Gene3D Phosphorylase Kinase; domain 1 1 51 - -
Sebi29g00037 694 Pfam Protein kinase domain 360 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi29g00037 694 Pfam Protein kinase domain 2 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi29g00037 694 Gene3D Transferase(Phosphotransferase) domain 1 52 295 - -
Sebi29g00037 694 SUPERFAMILY Protein kinase-like (PK-like) 337 653 IPR011009 -
Sebi29g00037 694 Gene3D Transferase(Phosphotransferase) domain 1 437 661 - -
Sebi29g00037 694 FunFam Receptor-like protein kinase ANXUR2 326 436 - -
Sebi29g00037 694 PANTHER OS07G0166700 PROTEIN 344 661 IPR045272 GO:0004714|GO:0006468
Sebi29g00037 694 ProSitePatterns Protein kinases ATP-binding region signature. 365 390 IPR017441 GO:0005524
Sebi29g00037 694 ProSiteProfiles Protein kinase domain profile. 359 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00037 Sebi-Chr29 514865 518312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00037 324 668 Receptor kinase-like Gene Family AT5G38990 41.667 1.29e-70 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi29g00037 Pkinase 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00037 - - adu:107486597 532.717