Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00036 ATGGCTGATGAGGTCACCGAGAAGGTCATAGAGCAGTGTCAGGTTAGTCCTCCACCACCTTCTCTTCCTTCCGTCTCCGTTCCTCTAAGTTACCTTGACATCCCTTGGCTTTACCTTCCCCCAGTCAAACATATTTTCTTCTATGACTTCCCTTATCCAACCCAACACTTCCTTCAAACTCTCCTTCCTAATCTCAAGCACTCTCTTTCACTCACTCTCCAACACTTCTTCCCCTTCGCTGCTAATGTCCTCCTCCCTCCAAAGCCCCAACCCCCTCACATCCTCTACTCCCCAGGTGACTCTGCCCCTTTTACCGTTGTTGAATCCACAGCAGATTTCACTCGCTTTGTATCCGATTCCCCAAGAGATCTCACAGATGAGTACCCTTTTGCTCCCCTGCTTCCTTCACCAACTACCTTACAAGATGGCACTTTGTTGGTCCCAACTATGGCCATCCAAGTCACTGTTTTCGCCAACTCTGGACTCATCATCTGTGTTGCCTTCAGACACGAGGTTGCAGATGGTAAATCGTTTCATCATTTCATGAAGTTTTGGGCTTCAACTTGTAGATCAACAACAGGGGACTCTCACTCTGCTTCCTCATCACTTCCCCTGCCGTTGCACAACAGGGACATGATTGAAGACCCAAAAGGGCTTAAGCCCATTTTCTTGGAGCAAATGTGGAATCGTCCACCACCATTCACCACACAATCCTTCCATGATGCTGCTACCGACATGGTGCGTCACAGATTCATATTAAGCCGTCACCAAGTTGAAAAACTCAAGAAATGGGTGGCTGTTAGATGTGAAAGCATCGGTCTTGAGACACTGCACTTGTCAACATTTACTGTGACAGTTTCTTTGTTTTGGGTTTGTAAGGTGAAATCTGAAGACACTGATGTTTGTAGTGTTCCTGACAATGAGGATTGCTACTGTTTTTGTTTTCCAATAGATTGGCGTAACCGTGATGAGGTTTCAATTCCATCCACATACTTTGGAAATTGCTTGACAAATAGCATTGTGACACTCCACAGGAGCAAGATAATGGGAGAAAATGGTATTTGTGAGGCAGTGCATGCTATTGGAAGCCAAATTAGAGGACTGAAGGGTGATCCTTTGAAAGGGGCTGATGGGTTTATGTCAGGTAGTAATAGTAGGGAGTTGATGAAATGGTTCCAGCGACAGAGAGTGACACTAATCTCAGGCTCACCAAAGTTTAATGTGTATCAGACTGATTTTGGGTGGGGAAAGCCCAGGTTGAGACATTCACTTCATGATTCAGCAACAATGTGCCCTTCTGATTGTAGGGAAGAAGAACACGGTATTGAAGTTGCGCTACTGCTCAAAAGAGCTCAAATGAAGAAAACTCCATACCATCTTGGAAGAGCAACTTAG 1395 0.4545 MADEVTEKVIEQCQVSPPPPSLPSVSVPLSYLDIPWLYLPPVKHIFFYDFPYPTQHFLQTLLPNLKHSLSLTLQHFFPFAANVLLPPKPQPPHILYSPGDSAPFTVVESTADFTRFVSDSPRDLTDEYPFAPLLPSPTTLQDGTLLVPTMAIQVTVFANSGLIICVAFRHEVADGKSFHHFMKFWASTCRSTTGDSHSASSSLPLPLHNRDMIEDPKGLKPIFLEQMWNRPPPFTTQSFHDAATDMVRHRFILSRHQVEKLKKWVAVRCESIGLETLHLSTFTVTVSLFWVCKVKSEDTDVCSVPDNEDCYCFCFPIDWRNRDEVSIPSTYFGNCLTNSIVTLHRSKIMGENGICEAVHAIGSQIRGLKGDPLKGADGFMSGSNSRELMKWFQRQRVTLISGSPKFNVYQTDFGWGKPRLRHSLHDSATMCPSDCREEEHGIEVALLLKRAQMKKTPYHLGRAT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00036 464 Gene3D - 242 458 IPR023213 -
Sebi29g00036 464 PANTHER - 8 455 - -
Sebi29g00036 464 Pfam Transferase family 20 455 - -
Sebi29g00036 464 Gene3D - 6 235 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00036 Sebi-Chr29 510037 511431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00036 32 418 Monolignol Biosynthesis Gene Families AT5G48930 21.516 1.19e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00036 - - gmx:100782335 505.368