Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00034 ATGCATAGATCAGATACTGGCCAAGGATTACGAGAGTTCATGAATGAAATTGAGTTGCTCTGTCAGCTTCATCACCCTAATTTGATCTCTCTCATAGGATTCTGCAACCACAAAGATGAGAAGATTATTGTGTATGAGTACATGTCCAATGGATCTCTCTATGATCACCTACACAATAAGGACATGGAACCACTCTCATGGAAGAAAAGGCTAGAGATTTGTATAGGAGTAGCACGTGGGGTGCACTACCTTCACACAGGAGCCAAGCGCACTATCATTCACTGCCACATAAGCCCCAAGAGCATTCTTTTGGACAATAATATGGTACCTAAAATCTCAGAATTCGGACTTTCCTTAAAGGGACAACATTTTACATCCAAGCCAAAACCAACACCAATACCAGATGATGAATTTACTACATTTGCAGGTACATATAGTTACACAGCCCCTGAGGTGGTATTTAACATGACCATCACAGATAAAGGTGATGTTTATTCCTTTGGTATAGTTCTACTAGAAGTGGTATGCACGGATAACAGGCTAAAAATGTGGCAGGGGCATCCAATTGAGGATATTATTGATCTGAAAATCAGAGGAAATATTGCACCAGAGTGTTGGGAAGTGTTTATGGATATCACAAAAAGATGCTTAAATGATGAACCGGATGAGCGACCAACGATGGGTGAAGTAGAGGTGCAACTTGAGTGTGCTCTGACTTTGCAGGAAGAAGCAGATATAAAAAAGACAATTAGTGATTATACCTTATTATCCACCACCACCATTAATAGTCGTCTACTAGAAGTAGAAGATGTCAACTTTATGAGTGATTGA 831 0.3995 MHRSDTGQGLREFMNEIELLCQLHHPNLISLIGFCNHKDEKIIVYEYMSNGSLYDHLHNKDMEPLSWKKRLEICIGVARGVHYLHTGAKRTIIHCHISPKSILLDNNMVPKISEFGLSLKGQHFTSKPKPTPIPDDEFTTFAGTYSYTAPEVVFNMTITDKGDVYSFGIVLLEVVCTDNRLKMWQGHPIEDIIDLKIRGNIAPECWEVFMDITKRCLNDEPDERPTMGEVEVQLECALTLQEEADIKKTISDYTLLSTTTINSRLLEVEDVNFMSD 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00034 276 Gene3D Transferase(Phosphotransferase) domain 1 49 259 - -
Sebi29g00034 276 Pfam Protein tyrosine and serine/threonine kinase 7 233 IPR001245 GO:0004672|GO:0006468
Sebi29g00034 276 PANTHER OS07G0166700 PROTEIN 4 241 IPR045272 GO:0004714|GO:0006468
Sebi29g00034 276 PIRSF ILK 2 251 - -
Sebi29g00034 276 SUPERFAMILY Protein kinase-like (PK-like) 6 240 IPR011009 -
Sebi29g00034 276 ProSiteProfiles Protein kinase domain profile. 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi29g00034 276 FunFam Receptor-like protein kinase ANXUR2 48 256 - -
Sebi29g00034 276 Gene3D Phosphorylase Kinase; domain 1 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00034 Sebi-Chr29 500773 501789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00034 8 261 Receptor kinase-like Gene Family AT1G30570 42.593 1.20e-63 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi29g00034 PK_Tyr_Ser-Thr 7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00034 - - lja:Lj1g3v3039470.1 421.009