Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00033 ATGGTGCCCAAACTCTCAGACTTGAGGGTTTCATTACAGGGACCTCTGTTTAAGTCAAAGCCAAAACCAAAGTCCATATTGAATGAGAACTTCATAGGTACCTATGGTTACGTGGCACCTGAGATTTTACAAAACAATGCAGTAACAGATAAGTGTGATGTTTACTCCTTTGGCATAGTTCTACTAGAAGTGGTATGCACGGACAAGATACAGCTTGTTAAGAGGCAGAGGCACCCTGTGGAGGAGAATATTGATCCGAACATCAAAGGAAAGATTGCAGCAGAGTGTTGGGAAGTGTTTGTGGATGTCACAGAGAGATGCTTGAAGCATGATCCATATGAGAGACCAGCAATGGGTGAAGTAGAGATGCAACTTGAGCTTGCTCTGTCACTGCAGGAACAAGCTGATGCCAGAAACACTGTTGGTGATCCTTATACCTTATTAACTACAACCATCATTGATCCTCCACCAGAAGAGGAGTCAATTTTAGCCAAAAAGTTAACTTGA 507 0.426 MVPKLSDLRVSLQGPLFKSKPKPKSILNENFIGTYGYVAPEILQNNAVTDKCDVYSFGIVLLEVVCTDKIQLVKRQRHPVEENIDPNIKGKIAAECWEVFVDVTERCLKHDPYERPAMGEVEMQLELALSLQEQADARNTVGDPYTLLTTTIIDPPPEEESILAKKLT 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00033 168 PANTHER OS07G0166700 PROTEIN 1 132 IPR045272 GO:0004714|GO:0006468
Sebi29g00033 168 SUPERFAMILY Protein kinase-like (PK-like) 26 131 IPR011009 -
Sebi29g00033 168 Coils Coil 164 168 - -
Sebi29g00033 168 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi29g00033 168 Pfam Protein kinase domain 22 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi29g00033 168 Gene3D Transferase(Phosphotransferase) domain 1 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00033 Sebi-Chr29 498728 499428 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00033 1 139 Receptor kinase-like Gene Family AT5G39000 35.065 3.86e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi29g00033 Pkinase 2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00033 - - gmx:100775244 216.853