Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00030 ATGATGTTTCTCAAGTATTTAGGTTTCTGTCGTTCGAATTCGAAGCATACAAGTTCATCTCAGAGACAGTATCCAACTGTAATAGAAGAGCTATGCCATCAGTTTTCTCTGTCAGATGTTACGAAATCAACCAACAACTTTGATAAAAATCTAATACTTGGAGAAGGAGGTGATTGTACAGTATACAAAGGTTGTCTGCAGTACAATGGAACTAATGATTATACAGTCGCAATCAAACGAATTTATGCAAATACAGAAAAGGAAATCAAAGAGTTCAAAAAGGAAATTGAGATGCTCTGCCAACTTCATCATCCTAATTTGATGACTTTAATAGGATATTGTGACAGCACAAATGAGAAGATTATTGTGTATGAGTACATGGCTAATGGAGCTCTCTATTATCGCCTATCTAATGGTATAAACAAAGAACCACTCTCATGGAAGCAAAGGGGGCCTCTGTTTAAGTCAAAGCCAAAACCAAAGTCCATATTAAATGAGAACTTCATAGGTACATATGGTTACGTGGCTCCTGAGGTTTTACAAAACAAAACAGTAACAGATAAGAGTGACGTTTACTCCTTTGGCATGGTTCTGCTAGAAGTGGTATGCACGGACAAGATAGAACTTGTTAAGAGGCAGAGGCACCCTGTGGAAGAGAATATTGATCCGAACATCAAAGGAAAGATTGCAGCAGAGTGTTGGAAAGTGTTTGTGGATGTCACAGAGAGATGCTTGAAGCATGATCCATATGAGAGACCAGCAATGGGTGAAGTAGAGATGCAACTTGAGCTTGCTCTGTCACTGCAGGAAGAAGCAGACAACAGAAACACTAGCGGTGATCATTATACCTTATTATCTACAACAATTTTTGATCCTCCACCAGAAGAGGTTTCCATTTTTGCCAAAAATAAACTTTGTGCATGTCCGAATCCTTTTTCACTAGAAACTAGTATGGTTCCCTAA 963 0.3853 MMFLKYLGFCRSNSKHTSSSQRQYPTVIEELCHQFSLSDVTKSTNNFDKNLILGEGGDCTVYKGCLQYNGTNDYTVAIKRIYANTEKEIKEFKKEIEMLCQLHHPNLMTLIGYCDSTNEKIIVYEYMANGALYYRLSNGINKEPLSWKQRGPLFKSKPKPKSILNENFIGTYGYVAPEVLQNKTVTDKSDVYSFGMVLLEVVCTDKIELVKRQRHPVEENIDPNIKGKIAAECWKVFVDVTERCLKHDPYERPAMGEVEMQLELALSLQEEADNRNTSGDHYTLLSTTIFDPPPEEVSIFAKNKLCACPNPFSLETSMVP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00030 320 SUPERFAMILY Protein kinase-like (PK-like) 22 266 IPR011009 -
Sebi29g00030 320 Gene3D Phosphorylase Kinase; domain 1 7 126 - -
Sebi29g00030 320 Coils Coil 82 102 - -
Sebi29g00030 320 FunFam Receptor-like protein kinase ANXUR2 10 126 - -
Sebi29g00030 320 Gene3D Transferase(Phosphotransferase) domain 1 151 286 - -
Sebi29g00030 320 ProSiteProfiles Protein kinase domain profile. 1 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi29g00030 320 PANTHER OS07G0166700 PROTEIN 159 269 IPR045272 GO:0004714|GO:0006468
Sebi29g00030 320 Pfam Protein tyrosine and serine/threonine kinase 52 139 IPR001245 GO:0004672|GO:0006468
Sebi29g00030 320 Pfam Protein tyrosine and serine/threonine kinase 171 262 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00030 Sebi-Chr29 491014 492207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00030 12 316 Receptor kinase-like Gene Family AT1G30570 33.333 1.04e-49 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi29g00030 PK_Tyr_Ser-Thr 2.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00030 - - gmx:100775244 358.607