Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00021 ATGGACCATTCCACCACCATCCCAACTCTCGCTCAAAACAGCCAGATCGATGGGGTTGAGTTGTTTAATTTGCTGCTTGATGATGGGAATCAACGGCCCTCTTCGAGTGATGTGGTTGGGGTTTTGGAGTTTGCATATATTGCAGGCAATAAATGCAACTCCTGGCAAACCTCAAGTTGTGTTGTGACAAAGAAAAGAAATCCATCCTTTGTTTTCTTCAACAAACACTTGTACCAAAAGGTTAACTCATACGTCCCTGATGATAATTATGCTGTTAACTGTGGTGACTCAAATGATGTTACCATTTATAATCGAATCTGGGTTGGAGACGACGTTAACACCAAGCAGTACTTTTCTATCATTGAACCACAAACAGGGCAATCATCTGTCAAAGCCGATGCTCTTAACCGTTTTCCAGGAAACCTTACCCTTCTCAAAGACTTCAACGCTTCACTTTGGGTTCAAAATGATGAAAAGACAATCACCAAAGAATACTGTGTCAACGTGGAAACAGGGGGTGAGAGGCTAAACATAACTTTCCTTCCCAGCAATAATCACTCTGATGCTTATGCTTTATCAACGGGATCGAGGTCGTGTCTATGCCTTCCTTTCTCTATTACACTGATCCCAGCGACTTCAATTATAATGGTCAATGTTGGCGATAACCAGGTTCCTCCGAGCAACGATACTGCCATGTTCCGGAATTGGGACAATGATTATCCTGATTACTTGGAGAAGCAATATCCACTCAGTGTGTCAACTGGCTATGCACTTCAACTCAACTATAGAAATAATACAATTCCCAATTACACAGCACCAGCCGCTGTATACTTAACTGCCAGAAGTTACGGGATGGATGCGACCGAGGATTATAATGTAACTTGGAATTTCGAAGTGGATTCACAGTTTAATTATATGGTCAGGTTACATTTCTGCGAGTTTGACAAGCTGATCCAGGTTGGGGGCGATAGAGTTTTTCAGATTTTTATAGCTGAGACTTTGGCTGAGGAAAACGCCGATGTGATAAACTGGAGTGGCGGTAACTTAGTTCCTGTTCATAAGGATTATGCTGTGTTTTTGACCACCCAAGGAAGCGCTAAGAGTGAGACGGTCAATCTTTCGATTAAGCTGCAACGATTGCCAAAGAACATAATCAGCAAACACCGTGATGTCATACTGAATGGTATTGAGATTTTTAAAATAAGTGATGAGCATAACAATCTCGCCGGACCGAATCCCAAACTCATTCTATCTCCACCCCAACAAGGATCACAAACCCAATCTTCCAAACACGCAAAAACCACTACAATTATCGTTGCGGTGGTTGCAGTTTCAGGCCTCATGCTAGTAGCGTCTGTTATTGGCATCATGGTTTTTCAGCGAAAAAGGATAAGTGGTGATCAAGAGAGGGACGAAAATTCGTGGAAGACAAAGACGGAAGAGATCAGAGCTGCCACAAACAACTTCGATGACGTTTTCATCGTTGGAGTTGGAGGATTTGGCCACGTGTATAAAGGTTACATCGATGGAACCACACCCGTTGCGATCAAACGCCTCAAACCTGGTTCTCAACAAGGTGCCAAGGAGTTCATGAACGAGATCGAGATGCTCTCTCAGCTTCGCCACCTCCATTTGGTTTCCCTCATTGGCTACTGCAACGATGGTGTAGAGATGATACTCGTTTATGACTTCATGGCGCGTGGCACTCTCCGCGACCAGATGGCAATGAGTTGCTTGCGTGATGATGGGAATCAACGGCCCTCGATGAATGATGTGGTTGGGGCATTACAGTTTGCGTTGCAGTTGGTGGAGGGTGAAGAAGAAGATAATAACAAGTTGGGTGGGACCCATGAAGACGGAAACAGTAAGGAAAGACTATGGTTACCGCAGTTTATTAATATGAGTGATGAAGGGAGTGATATGCGATTCAGTAGTACTAGTAGTGATAACATTGGGTCCCAGACCAGCGGTATAACCACAGTCTCAGCCAGTAGCGAGGAACAACCTTTGGTTTCTTCTGCTACGGTCTTCTCAGAGATTGGGAACCCAAGAGCACGATAG 2061 0.4415 MDHSTTIPTLAQNSQIDGVELFNLLLDDGNQRPSSSDVVGVLEFAYIAGNKCNSWQTSSCVVTKKRNPSFVFFNKHLYQKVNSYVPDDNYAVNCGDSNDVTIYNRIWVGDDVNTKQYFSIIEPQTGQSSVKADALNRFPGNLTLLKDFNASLWVQNDEKTITKEYCVNVETGGERLNITFLPSNNHSDAYALSTGSRSCLCLPFSITLIPATSIIMVNVGDNQVPPSNDTAMFRNWDNDYPDYLEKQYPLSVSTGYALQLNYRNNTIPNYTAPAAVYLTARSYGMDATEDYNVTWNFEVDSQFNYMVRLHFCEFDKLIQVGGDRVFQIFIAETLAEENADVINWSGGNLVPVHKDYAVFLTTQGSAKSETVNLSIKLQRLPKNIISKHRDVILNGIEIFKISDEHNNLAGPNPKLILSPPQQGSQTQSSKHAKTTTIIVAVVAVSGLMLVASVIGIMVFQRKRISGDQERDENSWKTKTEEIRAATNNFDDVFIVGVGGFGHVYKGYIDGTTPVAIKRLKPGSQQGAKEFMNEIEMLSQLRHLHLVSLIGYCNDGVEMILVYDFMARGTLRDQMAMSCLRDDGNQRPSMNDVVGALQFALQLVEGEEEDNNKLGGTHEDGNSKERLWLPQFINMSDEGSDMRFSSTSSDNIGSQTSGITTVSASSEEQPLVSSATVFSEIGNPRAR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00021 686 FunFam receptor-like protein kinase FERONIA 458 564 - -
Sebi29g00021 686 FunFam FERONIA receptor-like kinase 211 402 - -
Sebi29g00021 686 Pfam Protein tyrosine and serine/threonine kinase 495 603 IPR001245 GO:0004672|GO:0006468
Sebi29g00021 686 Gene3D - 211 402 - -
Sebi29g00021 686 SUPERFAMILY Protein kinase-like (PK-like) 480 576 IPR011009 -
Sebi29g00021 686 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
Sebi29g00021 686 ProSiteProfiles Protein kinase domain profile. 489 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi29g00021 686 MobiDBLite consensus disorder prediction 638 686 - -
Sebi29g00021 686 MobiDBLite consensus disorder prediction 638 679 - -
Sebi29g00021 686 Gene3D Phosphorylase Kinase; domain 1 455 564 - -
Sebi29g00021 686 Pfam Malectin-like domain 136 401 IPR024788 -
Sebi29g00021 686 PANTHER OS03G0124300 PROTEIN-RELATED 140 191 IPR046957 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00021 Sebi-Chr29 401985 405623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00021 573 686 Receptor kinase-like Gene Family AT3G51550 32.231 1.61e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi29g00021 Malectin_like 2.2e-20 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00021 - - mtr:25497555 510.375