Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi29g00013 ATGGCTTCTTCTCCCAAGAGCTCCATCAAAATCCATGACCACTGCGTTGTAACTCCTTCACCATCAGATCAAACTCATCTATCTCTCCCTCTCACATTCTTTGATTTGTTTTGGCTCAAGTTCCACCCAGTTGAACGCATCTTCTACTACACCCTTCCTCTTCCTCTTTCAAACCCATCATTTTTCTTTGACAAAGTGGTTCCAAAGCTCAAAGCCTCACTCTCTCACACCCTCCAACACTTCCTCCCTTTAGCTGGTAACATCGTTTGGCCTTCTGATTCCAACAAACCCTTCATCCAATTCAACCCTGGGGATGGGGTCTCATTGGTCCTAGCACAGTGTGATGATGAAAATGCAAACTTCAATCAAATATTGGAACACAATTCACCTCGTGAAGCCATGGAGTCTCGCAATTTGACACCCCACTTGGAATCATCAGATTCTTTTGCGGATGTTATCTCCCTGCAGATAACTCTGTTTCCACACAGTGGCTTTTCCATTGGTATCAGCACCCACCATGCTGTTCTTGATGGAAAATCTTCAACCTTGTTCATCAAGGCCTGGGCTTCTATATGTAAATCAGATGAAAATTCACCATCTTTGGTGCCAAAGTTGAAGCCTTTTTTGGACAGAGAAGTCATCAAGGATCCAAATGGGCTTGAAAATTTGTTTATTAACAACTGGGTAGAGATCGCATCCCAATTTGACCCTTCAGGGAACAGCAACAGGAGAAGCTTGAAGATTATGCCAAACCCATCTGAACTAATCATGGATCAATCTTTCCGAGCCACTTTCGAGCTCACACGTGGTGATTTGGAGAATCTGAAGAAAAGGGTGTTGTCCATGTGGGACATGGTGGAAGGAGCAGAACCAAATGAAGCAATTGATTCTTCAAAGCCAACAACTTTATCAACCTTTGTTATTACCTGTGCTTATGTTTCTGTCTGCATTGCCAAGGCCATTCAAGAAGCTGAAAAGGATAAACAAAAATTTGCTTTTGGGTTCACTGTGGATTGCAGGGCTAGGTGGGAACCTCCAATCCCTGAGAACTATTTTGGCAATTGTGTATGTTCTCATATAGTGGACACAGAGTCAGAGGACTTCACAAAGGAAGATGGGTTAGTCATTGTTGCTAAGAAGATTTATAGTAAAATAAAGAAATTGGATGAAAAACCTCTTGATGGAGTTGAGACACTGGTGTTTAGATTTATGGCTATGACAATTGAGGGAATTAAAGGAATGGGAGTTGCTGGGTCAACCAGGTTTGGAGTATATGGAACTGATTTTGGTTGGGGAAGGCCTTCTAAGGTGGAGATAGTATCAGTGGATAGAGGATTAACCATTGGCATGACAGAGAGAAAGGATGGGAAGGGTGGTGTTGAAGTTGGGCTTGTTCTTAATAAGCATGTGATGGATCTGTTTTCTACTTTTTTCCATGCAGGATTATGCTTTGAGTGA 1458 0.4239 MASSPKSSIKIHDHCVVTPSPSDQTHLSLPLTFFDLFWLKFHPVERIFYYTLPLPLSNPSFFFDKVVPKLKASLSHTLQHFLPLAGNIVWPSDSNKPFIQFNPGDGVSLVLAQCDDENANFNQILEHNSPREAMESRNLTPHLESSDSFADVISLQITLFPHSGFSIGISTHHAVLDGKSSTLFIKAWASICKSDENSPSLVPKLKPFLDREVIKDPNGLENLFINNWVEIASQFDPSGNSNRRSLKIMPNPSELIMDQSFRATFELTRGDLENLKKRVLSMWDMVEGAEPNEAIDSSKPTTLSTFVITCAYVSVCIAKAIQEAEKDKQKFAFGFTVDCRARWEPPIPENYFGNCVCSHIVDTESEDFTKEDGLVIVAKKIYSKIKKLDEKPLDGVETLVFRFMAMTIEGIKGMGVAGSTRFGVYGTDFGWGRPSKVEIVSVDRGLTIGMTERKDGKGGVEVGLVLNKHVMDLFSTFFHAGLCFE 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi29g00013 485 PANTHER - 9 482 - -
Sebi29g00013 485 Gene3D - 8 240 IPR023213 -
Sebi29g00013 485 Gene3D - 258 484 IPR023213 -
Sebi29g00013 485 Pfam Transferase family 9 475 - -
Sebi29g00013 485 SUPERFAMILY CoA-dependent acyltransferases 296 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi29g00013 Sebi-Chr29 227052 228509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi29g00013 9 478 Monolignol Biosynthesis Gene Families AT5G48930 23.750 1.72e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi29g00013 - - gmx:100813762 661.759